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Related Experiment Videos

CNGBdb: China National GeneBank DataBase.

Feng Zhen Chen1, Li Jin You1, Fan Yang1

  • 1China National GeneBank, Shenzhen 518120, China.

Yi Chuan = Hereditas
|September 21, 2020
PubMed
Summary

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The China National GeneBank DataBase (CNGBdb) provides a platform for archiving and sharing multi-omics data in life science. It supports big data research through international cooperation and data sharing initiatives.

Area of Science:

  • Bioinformatics
  • Genomics
  • Data Science

Background:

  • Life science research is entering a big data era driven by high-throughput sequencing.
  • There is a growing need for international cooperation and data sharing in life science.
  • China National GeneBank (CNGB) established CNGBdb as a service portal for its Bio-informatics Data Center.

Purpose of the Study:

  • To establish a national public platform for archiving and sharing multi-omics data.
  • To promote systematic management, application, and industrial utilization of life science data.
  • To enhance data computation and analysis capabilities for life science research.

Main Methods:

  • Systematic archiving of multi-omics data.
  • Providing data search engines, management, and analysis services.
Keywords:
China National GenBank Databasedata archivingdata sharingomics data

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  • Utilizing a data schema covering projects, samples, experiments, runs, assemblies, variations, and sequences.

    • Main Results:

    • CNGBdb has archived 2,176 research projects and over 2,221 TB of sequencing data as of May 22, 2020.
    • The platform offers comprehensive data archiving and analysis services.
    • Data is submitted by researchers globally, indicating international reach.

    Conclusions:

    • CNGBdb serves as a crucial national platform for multi-omics data archiving and sharing.
    • The platform facilitates big data research in life science through robust data management and analysis.
    • Continued dedication to promoting data sharing and improving service capabilities is planned for the future.