Related Experiment Video
Updated: Dec 8, 2025

09:42
Unraveling Entropic Rate Acceleration Induced by Solvent Dynamics in Membrane Enzymes
Published on: January 16, 2016
9.3K
Deciphering High-Order Structural Correlations within Fluxional Molecules from Classical and Quantum Configurational
Rafał Topolnicki1,2, Fabien Brieuc1, Christoph Schran1
1Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, Bochum 44780, Germany.
Journal of Chemical Theory and Computation
|September 22, 2020
Summary
We developed a new method to analyze complex molecular correlations, revealing how quantum effects and temperature influence protonated acetylene
Area of Science:
- Computational Chemistry
- Chemical Physics
- Molecular Dynamics
Background:
- Fluxional molecules exhibit complex structural dynamics.
- Understanding high-order correlations is crucial for molecular behavior.
- Protonated acetylene serves as a model for large-amplitude motion.
Purpose of the Study:
- To apply a parameter-free, entropy-based method to decode high-order structural correlations.
- To investigate the temperature dependence and impact of nuclear quantum effects on these correlations.
- To analyze the transition from quantum to classical descriptions of molecular correlations.
Main Methods:
- Utilized the kth nearest-neighbor estimator of configurational entropy.
- Employed machine learning techniques with high-dimensional neural network potential energy surfaces.
- Exhaustively sampled classical and quantum ensembles of protonated acetylene.
Main Results:
- High-order correlations are significant in fluxional molecules beyond simple bivariate analysis.
- Quantum delocalization and zero-point vibrations substantially reduce correlations at low temperatures.
- A quantum-to-classical crossover regime was identified between 100-800 K, with quantitative agreement only above 1000 K.
Conclusions:
- The developed entropy-based method effectively reveals complex many-body correlations.
- Nuclear quantum effects play a critical role in molecular correlations at low temperatures.
- The findings provide insights transferable to other molecular systems and experimental analyses.
Related Concept Videos
Entropy and Solvation
8.0K
The process of surrounding a solute with solvent is called solvation. It involves evenly distributing the solute within the solvent. The rule of thumb for determining a solvent for a given compound is that like dissolves like. A good solvent has molecular characteristics similar to those of the compound to be dissolved. For example, polar solutions dissolve polar solutes, and apolar solvents dissolve apolar solutes. A polar solvent is a solvent that has a high dielectric constant (ϵ...
8.0K
Entropy
34.3K
Salt particles that have dissolved in water never spontaneously come back together in solution to reform solid particles. Moreover, a gas that has expanded in a vacuum remains dispersed and never spontaneously reassembles. The unidirectional nature of these phenomena is the result of a thermodynamic state function called entropy (S). Entropy is the measure of the extent to which the energy is dispersed throughout a system, or in other words, it is proportional to the degree of disorder of a...
34.3K
Entropy
3.3K
The first law of thermodynamics is quantitatively formulated via an equation relating the internal energy of a system, the heat exchanged by it, and the work done on it. A quantitative formulation of the second law of thermodynamics leads to defining a state function, the entropy.
When an ideal gas expands isothermally, the disorder in the gas increases. From the molecular perspective, the gas molecules have more volume to move around in.
Consider an infinitesimal step in the expansion, which...
When an ideal gas expands isothermally, the disorder in the gas increases. From the molecular perspective, the gas molecules have more volume to move around in.
Consider an infinitesimal step in the expansion, which...
3.3K
¹H NMR of Conformationally Flexible Molecules: Temporal Resolution
1.1K
At room temperature, the chair conformer of cyclohexane undergoes rapid ring flipping between two equivalent chair conformers at a rate of approximately 105 times per second. These two chair conformers are in equilibrium. The rapid ring flipping results in the interconversion of the axial proton to an equatorial proton and an equatorial to the axial proton. Such interconversions are too rapid and cannot be detected on the NMR timescale. Hence, the NMR spectrometer cannot distinguish between the...
1.1K
¹H NMR: Interpreting Distorted and Overlapping Signals
1.3K
Spin systems where the difference in chemical shifts of the coupled nuclei is greater than ten times J are called first-order spin systems. These nuclei are weakly coupled, and their chemical shifts and coupling constant can generally be estimated from the well-separated signals in the spectrum.
As Δν decreases and the signals move closer, the doublets appear increasingly distorted. The intensities of the inner lines increase at the cost of those of the outer lines as the signals are...
As Δν decreases and the signals move closer, the doublets appear increasingly distorted. The intensities of the inner lines increase at the cost of those of the outer lines as the signals are...
1.3K
Predicting Molecular Geometry
43.3K
VSEPR Theory for Determination of Electron Pair Geometries
43.3K

