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Published on: July 8, 2020
Differential expression of peptides serves as an indicator of IgA nephropathy in pediatric patients
Chunbao Rao1,2, Fan Yang1, Zhijun Lai3
1Department of Pediatrics, The First Affiliated Hospital of Sun Yat-sen University, Guangzhou, Guangdong 510080, P.R. China.
Insights
Pediatric patients with IgA nephropathy (IgAN) show distinct serum peptide profiles. These identified peptide biomarkers may aid in diagnosing IgAN in children and developing new peptide-based therapies.
Area of Science:
- Biochemistry
- Pediatric Nephrology
- Proteomics
Background:
- Peptide profiles change with age, necessitating distinct biomarkers for pediatric populations.
- Adult peptide biomarkers may not accurately reflect disease states in children, including IgA nephropathy (IgAN).
Purpose of the Study:
- To investigate alterations in the serum peptidome of pediatric patients diagnosed with IgA nephropathy (IgAN).
- To identify potential peptide biomarkers for IgAN diagnosis in children.
- To explore novel therapeutic targets based on identified bioactive peptides in pediatric IgAN.
Main Methods:
- Serum samples from pediatric IgAN patients, healthy children, and children with other glomerular diseases were analyzed.
- Liquid chromatography with tandem mass spectrometry (LC-MS/MS) was employed for peptide enrichment and analysis.
- Bioinformatic analyses, including Gene Ontology and KEGG pathway analysis, were used to evaluate identified peptides.
Main Results:
- Significant differences in serum peptidome profiles were observed between pediatric IgAN patients and control groups.
- 123 peptides with a fold change >2 (P<0.05) and 48 peptides with a fold change >5 (P<0.05) were differentially expressed.
- Two putative bioactive peptides potentially involved in pediatric IgAN pathogenesis were identified.
Conclusions:
- The serum peptidome of pediatric IgAN patients is significantly distinct from healthy and other disease controls.
- Differentially expressed peptides may serve as valuable biomarkers for minimally invasive diagnosis of pediatric IgAN.
- Identified bioactive peptides offer a foundation for developing novel peptide-based therapies for IgAN.
Abstract:
Peptide profiles change significantly with aging and peptide biomarkers discovered in adult patients may not be suitable for the evaluation of pediatric patients. The present study was designed to explore alterations in the serum peptidome profile of pediatric patients with IgA nephropathy (IgAN). A total of 17 children diagnosed with IgAN were recruited as the experimental group, 11 sex-matched healthy children were recruited as a healthy control group and 18 sex-matched children with other glomerular diseases were recruited as a disease control group. Serum peptides of each subject were enriched and analyzed by liquid chromatography with tandem mass spectrometry and the subsequently identified IgAN-specific peptides were evaluated using Gene Ontology enrichment and Kyoto Encyclopedia of Genes and Genomes pathway analysis. Subsequently, the function of the IgAN-specific peptides was predicted via sequence comparison with other known functional bioactive peptides. A total of 123 peptides with a fold change >2 (P<0.05) and 48 peptides with a fold change >5 (P<0.05) were identified to be differentially expressed between the pediatric IgAN group and the two other groups. Consequently, two putative peptides that may have bioactive effects in the pathogenesis of IgAN in pediatric patients were identified. The serum peptidome profile of pediatric patients with IgAN was significantly different from the disease control group and the healthy control group. These differentially expressed peptides may serve as biomarkers for the minimally invasive diagnosis of pediatric patients with IgAN. Additionally, the potential bioactive peptides specifically expressed in pediatric IgAN patients that were identified in this study may lay a foundation for exploring new therapies for IgAN, such as the creation of novel peptide drugs.
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