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Antibody-Free Assay for RNA Methyltransferase Activity Analysis
Published on: July 9, 2019
m6 A RNA methyltransferases METTL3/14 regulate immune responses to anti-PD-1 therapy
Lingling Wang1, Hui Hui1,2, Kriti Agrawal1,2
1Division of Genetics, Department of Pediatrics, Program in Immunology, Institute for Genomic Medicine, University of California San Diego, La Jolla, CA, USA.
Abstract:
An impressive clinical success has been observed in treating a variety of cancers using immunotherapy with programmed cell death-1 (PD-1) checkpoint blockade. However, limited response in most patients treated with anti-PD-1 antibodies remains a challenge, requiring better understanding of molecular mechanisms limiting immunotherapy. In colorectal cancer (CRC) resistant to immunotherapy, mismatch-repair-proficient or microsatellite instability-low (pMMR-MSI-L) tumors have low mutation burden and constitute ~85% of patients. Here, we show that inhibition of N6 -methyladenosine (m6 A) mRNA modification by depletion of methyltransferases, Mettl3 and Mettl14, enhanced response to anti-PD-1 treatment in pMMR-MSI-L CRC and melanoma. Mettl3- or Mettl14-deficient tumors increased cytotoxic tumor-infiltrating CD8+ T cells and elevated secretion of IFN-γ, Cxcl9, and Cxcl10 in tumor microenvironment in vivo. Mechanistically, Mettl3 or Mettl14 loss promoted IFN-γ-Stat1-Irf1 signaling through stabilizing the Stat1 and Irf1 mRNA via Ythdf2. Finally, we found a negative correlation between METTL3 or METTL14 and STAT1 in 59 patients with pMMR-MSI-L CRC tumors. Altogether, our findings uncover a new awareness of the function of RNA methylation in adaptive immunity and provide METTL3 and METTL14 as potential therapeutic targets in anticancer immunotherapy.
Insights
Inhibiting RNA methylation (m6 A) via METTL3/14 depletion boosts anti-PD-1 cancer immunotherapy response. This approach enhances T-cell activity and cytokine production in resistant tumors, offering new therapeutic targets.
Area of Science:
- Immunology
- Oncology
- Molecular Biology
Background:
- Immunotherapy using PD-1 checkpoint blockade shows clinical success but has limited response rates in many cancer patients.
- Mismatch-repair-proficient/microsatellite instability-low (pMMR-MSI-L) colorectal cancer (CRC) represents ~85% of cases and is often resistant to immunotherapy due to low mutation burden.
Purpose of the Study:
- To investigate the role of N6 -methyladenosine (m6 A) mRNA modification in immunotherapy resistance.
- To explore the potential of targeting m6 A methyltransferases (METTL3/14) to enhance anti-PD-1 treatment efficacy in pMMR-MSI-L CRC and melanoma.
Main Methods:
- Depletion of methyltransferases Mettl3 and Mettl14 in pMMR-MSI-L CRC and melanoma models.
- Analysis of tumor-infiltrating immune cells, cytokine secretion (IFN-γ, Cxcl9, Cxcl10), and the IFN-γ-Stat1-Irf1 signaling pathway.
- Correlation analysis of METTL3/14 and STAT1 expression in patient tumor samples.
Main Results:
- Depletion of Mettl3 or Mettl14 significantly enhanced the response to anti-PD-1 therapy in pMMR-MSI-L CRC and melanoma.
- Mettl3/14 deficiency led to increased cytotoxic CD8+ T cells and elevated IFN-γ, Cxcl9, and Cxcl10 levels in the tumor microenvironment.
- Loss of Mettl3/14 stabilized Stat1 and Irf1 mRNA, promoting IFN-γ-Stat1-Irf1 signaling, with a negative correlation observed between METTL3/14 and STAT1 in CRC patients.
Conclusions:
- Inhibition of m6 A mRNA modification by targeting METTL3 and METTL14 can overcome resistance to anti-PD-1 immunotherapy.
- METTL3 and METTL14 play a crucial role in regulating adaptive immunity and T-cell responses within the tumor microenvironment.
- METTL3 and METTL14 represent promising therapeutic targets for improving anticancer immunotherapy outcomes, particularly in pMMR-MSI-L CRC.
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