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Related Experiment Video

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Quantitative Autonomic Testing
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Missing data techniques in classification for cardiovascular dysautonomias diagnosis.

Ali Idri1,2, Ilham Kadi3, Ibtissam Abnane3

  • 1Software Project Management Research Team, Mohammed V University, Rabat, Morocco. ali.idri@um5.ac.ma.

Medical & Biological Engineering & Computing
|September 24, 2020
PubMed
Summary

K-nearest neighbors (KNN) imputation improves classification accuracy for cardiovascular dysautonomias diagnosis compared to data deletion. Higher missing data percentages negatively impact diagnostic performance across all methods.

Keywords:
CardiologyKNN imputationMissing dataMissingness mechanism

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Area of Science:

  • Biomedical Informatics
  • Machine Learning in Healthcare
  • Data Mining

Background:

  • Missing data (MD) is prevalent in e-health datasets, necessitating pre-processing for data mining (DM) decision systems.
  • Effective MD handling is crucial for reliable diagnostic tools in healthcare.

Purpose of the Study:

  • To evaluate the impact of different missing data techniques on classification system accuracy for cardiovascular dysautonomias diagnosis.
  • To compare deletion versus k-nearest neighbors (KNN) imputation for handling missing values.

Main Methods:

  • Compared four classifiers: Random Forest (RF), Support Vector Machines (SVM), C4.5 decision tree, and Naive Bayes (NB).
  • Utilized two MD techniques: deletion and KNN imputation.
  • Conducted 216 experiments across three missingness mechanisms (MCAR, MAR, NMAR) and varying MD percentages (10-90%) on an autonomic nervous system (ANS) dataset.

Main Results:

  • K-nearest neighbors (KNN) imputation significantly enhanced the accuracy rates of all four classifiers compared to data deletion.
  • Increasing percentages of missing data negatively impacted classification performance across all tested mechanisms and techniques.
  • Accuracy rates consistently decreased as the percentage of missing data increased.

Conclusions:

  • KNN imputation is a superior strategy to deletion for improving classification accuracy in cardiovascular dysautonomia diagnosis.
  • Minimizing missing data is critical for optimizing the performance of machine learning models in clinical decision support systems.