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Updated: Dec 7, 2025

Gene Knock-in by CRISPR/Cas9 and Cell Sorting in Macrophage and T Cell Lines
Published on: November 13, 2021
Consequences of CRISPR-Cas9-Mediated CFTR Knockout in Human Macrophages
Shuzhong Zhang1, Chandra L Shrestha1, Benjamin L Wisniewski1,2
1Center for Microbial Pathogenesis, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, OH, United States.
Abstract:
Macrophage dysfunction is fundamentally related to altered immunity in cystic fibrosis (CF). How genetic deficits in the cystic fibrosis transmembrane conductance regulator (CFTR) lead to these defects remains unknown. Rapid advances in genomic editing such as the clustered regularly interspaced short palindromic repeats associated protein 9 (CRISPR/Cas9) system provide new tools for scientific study. We aimed to create a stable CFTR knockout (KO) in human macrophages in order to study how CFTR regulates macrophage function. Peripheral blood monocytes were isolated from non-CF healthy volunteers and differentiated into monocyte-derived macrophages (MDMs). MDMs were transfected with a CRISPR Cas9 CFTR KO plasmid. CFTR KO efficiency was verified and macrophage halide efflux, phagocytosis, oxidative burst, apoptosis, and cytokine functional assays were performed. CFTR KO in human MDMs was efficient and stable after puromycin selection. CFTR KO was confirmed by CFTR mRNA and protein expression. CFTR function was abolished in CFTR KO MDMs. CFTR KO recapitulated known defects in human CF MDM (CFTR class I/II variants) dysfunction including (1) increased apoptosis, (2) decreased phagocytosis, (3) reduced oxidative burst, and (4) increased bacterial load. Activation of the oxidative burst via nicotinamide adenine dinucleotide phosphate (NADPH) oxidase assembly was diminished in CFTR KO MDMs (decreased phosphorylated p47phox). Cytokine production was unchanged or decreased in response to infection in CFTR KO MDMs. In conclusion, we developed a primary human macrophage CFTR KO system. CFTR KO mimics most pathology observed in macrophages obtained from persons with CF, which suggests that many aspects of CF macrophage dysfunction are CFTR-dependent and not just reflective of the CF inflammatory milieu.
Insights
Creating a cystic fibrosis transmembrane conductance regulator (CFTR) knockout in human macrophages revealed that CFTR deficiency causes key immune cell defects, mimicking cystic fibrosis pathology.
Area of Science:
- Immunology
- Genetics
- Cell Biology
Background:
- Macrophage dysfunction is central to altered immunity in cystic fibrosis (CF).
- The precise mechanisms by which cystic fibrosis transmembrane conductance regulator (CFTR) genetic deficits cause these macrophage defects remain unclear.
- CRISPR/Cas9 gene editing offers novel tools to investigate CFTR's role.
Purpose of the Study:
- To establish a stable cystic fibrosis transmembrane conductance regulator (CFTR) knockout (KO) in primary human macrophages.
- To investigate the functional consequences of CFTR deficiency on macrophage immune responses.
Main Methods:
- Human peripheral blood monocytes were isolated and differentiated into monocyte-derived macrophages (MDMs).
- CRISPR/Cas9 gene editing was employed to create a CFTR KO in MDMs.
- Macrophage functions including halide efflux, phagocytosis, oxidative burst, apoptosis, and cytokine production were assessed.
Main Results:
- CRISPR/Cas9 mediated stable and efficient CFTR knockout in human MDMs.
- CFTR KO macrophages exhibited increased apoptosis, reduced phagocytosis, and diminished oxidative burst.
- Bacterial load was increased, and oxidative burst activation via NADPH oxidase assembly was impaired.
- Cytokine production in response to infection was generally unchanged or reduced.
Conclusions:
- A primary human macrophage CFTR knockout model was successfully developed.
- This CFTR KO model recapitulates critical aspects of macrophage dysfunction observed in cystic fibrosis patients.
- These findings strongly suggest that many CF macrophage defects are directly CFTR-dependent.
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