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Learning patterns of the ageing brain in MRI using deep convolutional networks.

Nicola K Dinsdale1, Emma Bluemke2, Stephen M Smith1

  • 1Wellcome Centre for Integrative Neuroimaging, FMRIB, Nuffield Department of Clinical Neurosciences, University of Oxford, United Kingdom.

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|September 26, 2020
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Summary

This study uses convolutional neural networks (CNNs) and UK Biobank data to predict brain age from MRI scans. Brain age prediction errors correlate with clinical measurements, offering insights into aging and disease.

Keywords:
Brain agingConvolutional neural networksUK Biobank

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Area of Science:

  • Neuroimaging
  • Artificial Intelligence
  • Gerontology

Background:

  • Brain morphological changes occur with normal aging and neurodegenerative diseases.
  • Age-related brain changes are complex, exhibiting subtle, nonlinear, and heterogeneous patterns.
  • Machine learning models can identify subtle patterns in brain appearance despite individual variability.

Purpose of the Study:

  • To predict chronological age using a 3D convolutional neural network (CNN) architecture.
  • To investigate the relationship between brain age prediction errors and clinical measurements.
  • To explore the impact of image registration on CNN-based age prediction.

Main Methods:

  • Developed a 3D CNN for brain age prediction using 12,802 T1-weighted MRI images for training and 6,885 for testing from the UK Biobank.
  • Analyzed correlations between predicted brain age errors (ΔBrainAge) and UK Biobank clinical data.
  • Examined the relationship between ΔBrainAge and image-derived phenotypes (IDPs) from multiple imaging modalities.
  • Investigated the effect of nonlinear image registration on CNN performance.

Main Results:

  • The CNN achieved competitive performance in chronological age prediction.
  • ΔBrainAge showed significant correlations with various clinical measurements in both male and female groups.
  • Correlations between ΔBrainAge and IDPs were consistent with known aging patterns.
  • Nonlinear image registration artifacts were found to negatively impact CNNs' ability to detect subtle aging indicators.

Conclusions:

  • CNNs, trained on UK Biobank MRI data, can predict brain age and identify deviations linked to clinical factors.
  • The study highlights the importance of appropriate image preprocessing, cautioning against using nonlinearly registered images.
  • Future longitudinal analysis of ΔBrainAge may reveal predictive value for health outcomes.