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Updated: Dec 7, 2025

Thermostabilization, Expression, Purification, and Crystallization of the Human Serotonin Transporter Bound to S-citalopram
Published on: November 27, 2016
Focus on Human Monoamine Transporter Selectivity. New Human DAT and NET Models, Experimental Validation, and SERT
Gabriella Ortore1, Elisabetta Orlandini2,3, Laura Betti1
1Department of Pharmacy, University of Pisa, Via Bonanno 6, 56126 Pisa, Italy.
Computational modeling of human monoamine transporters (DAT, NET, SERT) identified key structural differences influencing antidepressant drug selectivity. New potent serotonin transporter (SERT) inhibitors were discovered, with one compound showing higher affinity than paroxetine.
Area of Science:
- Computational chemistry
- Neuroscience
- Pharmacology
Background:
- Serotonin transporter (SERT) inhibitors are common antidepressants.
- Drug selectivity is influenced by transporter protein structure.
- Three human monoamine transporters (DAT, NET, SERT) are targets for drug development.
Purpose of the Study:
- To build computational models for human DAT, NET, and SERT.
- To predict inhibitor binding poses and develop 3D-QSAR models.
- To identify novel potent SERT inhibitors and understand selectivity determinants.
Main Methods:
- Homology modeling for hDAT and hNET.
- 3D-QSAR model development for DAT, NET, and SERT.
- Inhibitor binding pose prediction and validation with in-house compounds.
Main Results:
- Validated 3D structures for hDAT and hNET, compared to hSERT.
- Identified structural differences in binding sites correlated with inhibitor selectivity.
- Discovered potent SERT inhibitors (compounds 20a-d and 21a-d), with compound 20b showing superior affinity to paroxetine in human platelets.
Conclusions:
- Computational modeling provides insights into monoamine transporter structure-activity relationships.
- Novel potent SERT inhibitors were identified with potential therapeutic applications.
- Understanding transporter selectivity is crucial for developing effective antidepressant drugs.
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