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TRIM28 Regulates Dlk1 Expression in Adipogenesis
Hsin-Pin Lu1, Chieh-Ju Lin1, Wen-Ching Chen1
1Graduate Institute of Biochemical Sciences, College of Life Science, National Taiwan University, Taipei 10617, Taiwan.
Abstract:
The tripartite motif-containing protein 28 (TRIM28) is a transcription corepressor, interacting with histone deacetylase and methyltransferase complexes. TRIM28 is a crucial regulator in development and differentiation. We would like to investigate its function and regulation in adipogenesis. Knockdown of Trim28 by transducing lentivirus-carrying shRNAs impairs the differentiation of 3T3-L1 preadipocytes, demonstrated by morphological observation and gene expression analysis. To understand the molecular mechanism of Trim28-mediated adipogenesis, the RNA-seq was performed to find out the possible Trim28-regulated genes. Dlk1 (delta-like homolog 1) was increased in Trim28 knockdown 3T3-L1 cells both untreated and induced to differentiation. Dlk1 is an imprinted gene and known as an inhibitor of adipogenesis. Further knockdown of Dlk1 in Trim28 knockdown 3T3-L1 would rescue cell differentiation. The epigenetic analysis showed that DNA methylation of Dlk1 promoter and differentially methylated regions (DMRs) was not altered significantly in Trim28 knockdown cells. However, compared to control cells, the histone methylation on the Dlk1 promoter was increased at H3K4 and decreased at H3K27 in Trim28 knockdown cells. Finally, we found Trim28 might be recruited by transcription factor E2f1 to regulate Dlk1 expression. The results imply Trim28-Dlk1 axis is critical for adipogenesis.
Insights
Tripartite motif-containing protein 28 (TRIM28) is vital for adipogenesis, regulating fat cell differentiation. Its knockdown increases the adipogenesis inhibitor Dlk1, hindering differentiation, but this can be rescued by further Dlk1 knockdown.
Area of Science:
- Molecular Biology
- Epigenetics
- Cell Differentiation
Background:
- Tripartite motif-containing protein 28 (TRIM28) acts as a transcriptional corepressor, influencing development and differentiation.
- Adipogenesis, the process of fat cell formation, is a complex regulatory pathway crucial for metabolic homeostasis.
Purpose of the Study:
- To investigate the role and regulatory mechanisms of TRIM28 in adipogenesis.
- To identify genes regulated by TRIM28 during the differentiation of 3T3-L1 preadipocytes.
Main Methods:
- Utilized lentivirus-mediated shRNA to knock down Trim28 expression in 3T3-L1 cells.
- Performed morphological observation and gene expression analysis to assess differentiation.
- Employed RNA-sequencing (RNA-seq) to identify TRIM28-regulated genes.
- Conducted epigenetic analysis, including DNA and histone methylation assays on the Dlk1 promoter.
Main Results:
- TRIM28 knockdown significantly impaired 3T3-L1 preadipocyte differentiation.
- RNA-seq revealed increased expression of delta-like homolog 1 (Dlk1), an adipogenesis inhibitor, in TRIM28-knockdown cells.
- Knockdown of Dlk1 rescued the impaired differentiation observed in TRIM28-knockdown cells.
- Epigenetic analysis showed altered histone methylation (increased H3K4, decreased H3K27) at the Dlk1 promoter, but not DNA methylation changes.
- TRIM28 may be recruited by transcription factor E2f1 to regulate Dlk1 expression.
Conclusions:
- The TRIM28-Dlk1 axis plays a critical role in regulating adipogenesis.
- TRIM28 influences adipocyte differentiation potentially through epigenetic modulation of key genes like Dlk1.
- Understanding this pathway offers insights into metabolic regulation and potential therapeutic targets.
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