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Molecular mechanisms of KDM5A in cellular functions: Facets during development and disease
R Kirtana1, Soumen Manna1, Samir Kumar Patra1
1Epigenetics and Cancer Research Laboratory, Biochemistry and Molecular Biology Group, Department of Life Science, National Institute of Technology, Rourkela, Odisha, 769008, India.
Abstract:
Gene expression is influenced at many layers by a fine-tuned crosstalk between multiple extrinsic signalling pathways and intrinsic regulatory molecules that respond to environmental stimuli. Epigenetic modifiers like DNA methyltransferases, histone modifying enzymes and chromatin remodellers are reported to act as triggering factors in many scenarios by exhibiting their control over most of the cellular processes. These epigenetic players can either directly regulate gene expression or interact with some effector molecules that harmonize the expression of downstream genes. One such epigenetic regulator which exhibits multifaceted regulation over gene expression is KDM5A. It is classically a transcriptional repressor acting as H3K4me3 demethylase, but also is reported to act as an activator in many contexts either by loss of activity due to inhibition manifested by other interacting proteins or by downregulating the negative players of a given physiological process thereby escalating the framework. Through this review, we draw attention to the remarkable modes of functioning laid by KDM5A on transcriptional and translational processes, affecting gene expression during differentiation and development and finally summing up on role in disease causation (Fig. 1). We also shed light on different orthologs of KDM5A and their organism specific roles, along with comparison of the sequence similarity to extrapolate some unanswered questions about this protein.
Insights
KDM5A is a versatile epigenetic regulator influencing gene expression. This review details its dual role as a repressor and activator, impacting development and disease.
Area of Science:
- Molecular Biology
- Epigenetics
- Gene Regulation
Background:
- Gene expression is modulated by signaling pathways and intrinsic regulators.
- Epigenetic modifiers like DNA methyltransferases and histone modifiers control cellular processes.
- KDM5A is an epigenetic regulator with diverse roles in gene expression.
Purpose of the Study:
- To review the multifaceted functions of KDM5A in gene expression.
- To explore KDM5A's roles in transcriptional and translational regulation.
- To summarize KDM5A's involvement in development, differentiation, and disease.
Main Methods:
- Literature review of KDM5A functions.
- Analysis of KDM5A's mechanisms as a transcriptional repressor and activator.
- Comparative analysis of KDM5A orthologs across species.
Main Results:
- KDM5A acts classically as an H3K4me3 demethylase (transcriptional repressor).
- KDM5A can function as a transcriptional activator through various mechanisms.
- KDM5A's activity impacts differentiation, development, and disease pathogenesis.
Conclusions:
- KDM5A exhibits complex regulatory roles beyond simple repression.
- Understanding KDM5A's dual function is crucial for developmental biology and disease research.
- Further investigation into KDM5A orthologs may reveal conserved and unique functions.
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