Association of Genetic Variants with Hyperhomocysteinemia in Indian Patients with Thrombosis

Minal Umesh Paradkar1, Balkrishna Padate2, Swarup A V Shah1

  • 1Research Laboratories, P. D. Hinduja Hospital & Medical Research Centre, Lalita Girdhar Bldg (S1), Veer Savarkar Marg, Mahim, Mumbai 400016, India.

Insights

In Indian thrombosis patients, the MTHFR T677T genotype significantly elevates homocysteine levels, a risk factor for cardiovascular events. Other genetic variants in CBS and MS genes showed no significant association with hyperhomocysteinemia.

Area of Science:

  • Medical Genetics
  • Cardiovascular Research
  • Thrombosis Studies

Background:

  • Hyperhomocysteinemia is a known risk factor for thrombotic disorders including coronary artery disease, atherosclerosis, venous thrombosis, and stroke.
  • Genetic variants in MTHFR, CBS, and MS genes influence homocysteine metabolism, potentially leading to hyperhomocysteinemia.
  • Limited Indian data exists on genetic variants associated with hyperhomocysteinemia in thrombosis patients.

Purpose of the Study:

  • To investigate the prevalence of MTHFR, CBS, and MS genetic variants in Indian patients diagnosed with thrombosis.
  • To determine the association between specific genetic variants and elevated homocysteine levels in this patient cohort.

Main Methods:

  • Genetic variant analysis was conducted on thrombosis patients to identify mutations in MTHFR C677T (rs1801133), MTHFR A1298C (rs1801131), MS A2756G (rs1805087), and CBS T833C (rs5742905).
  • Mutant allele frequencies for MTHFR 677T, MTHFR 1298C, MS2756G, and CBS 833C were calculated.
  • Association between genotypes and homocysteine (Hcy) levels was analyzed.

Main Results:

  • Mutant allele frequencies were observed as: MTHFR 677T (16.1%), MTHFR 1298C (37.5%), MS2756G (34.1%), and CBS 833C (5.8%).
  • The MTHFR 677TT genotype showed a significant association with elevated homocysteine levels (64.65 μmol/L) compared to CC (32.43 μmol/L) and CT (30.54 μmol/L) genotypes.
  • No significant association was found between MTHFR A1298C, MS A2756G, and CBS T833C genotypes and higher Hcy levels.

Conclusions:

  • The MTHFR T677T genotype is significantly associated with hyperhomocysteinemia in Indian patients presenting with thrombosis.
  • This finding highlights the MTHFR T677T variant as a potential genetic risk factor for thrombosis-related hyperhomocysteinemia in the Indian population.

Related Concept Videos

Genome-wide Association Studies-GWAS01:11

Genome-wide Association Studies-GWAS

Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
15.0K
Anticoagulant Drugs: Low-Molecular-Weight Heparins01:30

Anticoagulant Drugs: Low-Molecular-Weight Heparins

Hemostasis is a crucial process that prevents excessive blood loss from damaged blood vessels. It involves various mechanisms such as vasoconstriction, platelet adhesion and activation, and fibrin formation. The importance of each mechanism depends on the type of vessel injury. In contrast, thrombosis is the abnormal formation of a blood clot within the blood vessels, leading to potential complications if the clot obstructs blood flow. Thrombosis can be caused by increased coagulability of the...
1.3K
Blood Studies for Cardiovascular System II: CRP, Hcy, and Cardiac Natriuretic Peptide Markers01:19

Blood Studies for Cardiovascular System II: CRP, Hcy, and Cardiac Natriuretic Peptide Markers

Cardiac biomarkers are critical in diagnosing, prognosing, and managing cardiovascular diseases. Routine measurement of specific biomarkers such as B-type natriuretic peptide (BNP), C-reactive protein (CRP), and homocysteine (Hcy) is common practice in clinical settings to evaluate heart function and predict cardiovascular events.
These markers indicate stress or strain on the heart muscle:
Natriuretic Peptides (BNP)
Cardiac myocytes produce these hormones in response to ventricular stretching...
396
Venous Thrombosis I: Introduction01:30

Venous Thrombosis I: Introduction

Venous thrombosis, the most common disorder of the veins, involves the formation of a thrombus or blood clot associated with vein inflammation. It can be classified as either superficial vein thrombosis or deep vein thrombosis.Superficial Vein Thrombosis: This involves the formation of a thrombus in a superficial vein, usually the greater or lesser saphenous vein. Though less severe than deep vein thrombosis (DVT), SVT can lead to complications if untreated.Deep Vein Thrombosis (DVT): This...
152
Venous Thrombosis II: Clinical Manifestations and Diagnostic Studies01:20

Venous Thrombosis II: Clinical Manifestations and Diagnostic Studies

The key difference between Superficial Vein Thrombosis (SVT) and Deep Vein Thrombosis (DVT) lies in their location and severity.Clinical ManifestationsSVT typically presents with localized pain, tenderness, and redness along the course of a superficial vein, often accompanied by a palpable, cord-like structure under the skin. This condition is usually less dangerous than DVT but can be uncomfortable and may lead to complications such as cellulitis or, rarely, a clot extension into the deep...
168
Single Nucleotide Polymorphisms-SNPs01:05

Single Nucleotide Polymorphisms-SNPs

A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
17.6K