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Association of Genetic Variants with Hyperhomocysteinemia in Indian Patients with Thrombosis
Minal Umesh Paradkar1, Balkrishna Padate2, Swarup A V Shah1
1Research Laboratories, P. D. Hinduja Hospital & Medical Research Centre, Lalita Girdhar Bldg (S1), Veer Savarkar Marg, Mahim, Mumbai 400016, India.
Insights
In Indian thrombosis patients, the MTHFR T677T genotype significantly elevates homocysteine levels, a risk factor for cardiovascular events. Other genetic variants in CBS and MS genes showed no significant association with hyperhomocysteinemia.
Area of Science:
- Medical Genetics
- Cardiovascular Research
- Thrombosis Studies
Background:
- Hyperhomocysteinemia is a known risk factor for thrombotic disorders including coronary artery disease, atherosclerosis, venous thrombosis, and stroke.
- Genetic variants in MTHFR, CBS, and MS genes influence homocysteine metabolism, potentially leading to hyperhomocysteinemia.
- Limited Indian data exists on genetic variants associated with hyperhomocysteinemia in thrombosis patients.
Purpose of the Study:
- To investigate the prevalence of MTHFR, CBS, and MS genetic variants in Indian patients diagnosed with thrombosis.
- To determine the association between specific genetic variants and elevated homocysteine levels in this patient cohort.
Main Methods:
- Genetic variant analysis was conducted on thrombosis patients to identify mutations in MTHFR C677T (rs1801133), MTHFR A1298C (rs1801131), MS A2756G (rs1805087), and CBS T833C (rs5742905).
- Mutant allele frequencies for MTHFR 677T, MTHFR 1298C, MS2756G, and CBS 833C were calculated.
- Association between genotypes and homocysteine (Hcy) levels was analyzed.
Main Results:
- Mutant allele frequencies were observed as: MTHFR 677T (16.1%), MTHFR 1298C (37.5%), MS2756G (34.1%), and CBS 833C (5.8%).
- The MTHFR 677TT genotype showed a significant association with elevated homocysteine levels (64.65 μmol/L) compared to CC (32.43 μmol/L) and CT (30.54 μmol/L) genotypes.
- No significant association was found between MTHFR A1298C, MS A2756G, and CBS T833C genotypes and higher Hcy levels.
Conclusions:
- The MTHFR T677T genotype is significantly associated with hyperhomocysteinemia in Indian patients presenting with thrombosis.
- This finding highlights the MTHFR T677T variant as a potential genetic risk factor for thrombosis-related hyperhomocysteinemia in the Indian population.
Abstract:
Hyperhomocysteinemia known to be associated with increased thrombotic tendency has been considered as a risk factor for coronary artery disease, atherosclerosis, venous thrombosis, and stroke. There are three main genes MTHFR, cystathionine beta-synthase (CBS) and methionine synthase (MS) and it's genetic variant that are known to influence the homocysteine metabolism leading to hyperhomocysteinemia. There is scarcity of Indian data on hyperhomocysteinemia and genetics variants in patients with thrombosis. Hence the objective of present study was to determine MTHFR, CBS, and MS genetic variants in thrombosis patients from Indian population. Genetic variant analysis was performed on thrombosis patients to detect MTHFR C677T (rs1801133), MTHFR A1298C (rs1801131), MS A2756G (rs1805087) and CBS T833C (rs5742905) mutations. The mutant allele frequencies of MTHFR 677T, MTHFR 1298C, MS2756G and CBS 833C were observed to be 16.1%, 37.5%, 34.1% and 5.8% respectively. MTHFR 677TT genotype was observed to be significantly associated with elevated homocysteine (Hcy) levels (64.65 μmol/L) alleles as compared to CC alleles (32.43 μmol/L) and CT alleles (30.54 μmol/L). MTHFR A1298C, MS A2756G and CBS T833C genotypes did not showed significant association with higher Hcy levels. Thus, in Indian patients with thrombosis only MTHFR T677T genotype was observed to be significantly associated with hyperhomocysteinemia.
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