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Orally bioavailable CDK9/2 inhibitor shows mechanism-based therapeutic potential in MYCN-driven neuroblastoma
Evon Poon1,2, Tong Liang3, Yann Jamin4
1Division of Clinical Studies and.
Abstract:
The undruggable nature of oncogenic Myc transcription factors poses a therapeutic challenge in neuroblastoma, a pediatric cancer in which MYCN amplification is strongly associated with unfavorable outcome. Here, we show that CYC065 (fadraciclib), a clinical inhibitor of CDK9 and CDK2, selectively targeted MYCN-amplified neuroblastoma via multiple mechanisms. CDK9 - a component of the transcription elongation complex P-TEFb - bound to the MYCN-amplicon superenhancer, and its inhibition resulted in selective loss of nascent MYCN transcription. MYCN loss led to growth arrest, sensitizing cells for apoptosis following CDK2 inhibition. In MYCN-amplified neuroblastoma, MYCN invaded active enhancers, driving a transcriptionally encoded adrenergic gene expression program that was selectively reversed by CYC065. MYCN overexpression in mesenchymal neuroblastoma was sufficient to induce adrenergic identity and sensitize cells to CYC065. CYC065, used together with temozolomide, a reference therapy for relapsed neuroblastoma, caused long-term suppression of neuroblastoma growth in vivo, highlighting the clinical potential of CDK9/2 inhibition in the treatment of MYCN-amplified neuroblastoma.
Insights
CYC065 selectively targets MYCN-amplified neuroblastoma by inhibiting CDK9 and CDK2. This drug reduces MYCN transcription, induces apoptosis, and reverses adrenergic gene expression, offering a promising therapy for this pediatric cancer.
Area of Science:
- Oncology
- Molecular Biology
- Pediatric Cancer Research
Background:
- MYCN amplification in neuroblastoma is linked to poor prognosis.
- Oncogenic Myc transcription factors are challenging therapeutic targets.
Purpose of the Study:
- To investigate the efficacy of CYC065 (fadraciclib), a CDK9 and CDK2 inhibitor, against MYCN-amplified neuroblastoma.
- To elucidate the mechanisms by which CYC065 targets neuroblastoma cells.
Main Methods:
- Assessing CYC065's effect on MYCN transcription and neuroblastoma cell viability.
- Investigating the role of CDK9 in MYCN superenhancer binding and transcription.
- Evaluating the impact of CYC065 on MYCN-driven gene expression programs.
- Testing combination therapy with temozolomide in vivo.
Main Results:
- CYC065 selectively inhibited MYCN transcription by targeting CDK9 at the MYCN-amplicon superenhancer.
- MYCN loss sensitized neuroblastoma cells to apoptosis upon CDK2 inhibition.
- CYC065 reversed MYCN-driven adrenergic gene expression in neuroblastoma.
- Combination therapy with temozolomide suppressed tumor growth in vivo.
Conclusions:
- CYC065 demonstrates significant therapeutic potential for MYCN-amplified neuroblastoma.
- Targeting CDK9/2 offers a selective approach to treating this aggressive pediatric cancer.
- CYC065's ability to reverse MYCN-driven gene expression is a key mechanism of action.
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