Profiling of specific long non-coding RNA signatures identifies ST8SIA6-AS1 AS a novel target for breast cancer

Zhanghan Chen1, Jie Huang1, Yanling Feng2

  • 1Department of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, China.

Abstract

Insights

Long non-coding RNA ST8SIA6-AS1 promotes breast cancer progression by enhancing cell proliferation, migration, and invasion. This study identifies ST8SIA6-AS1 as a potential therapeutic target for breast cancer treatment.

Area of Science:

  • Oncology
  • Molecular Biology
  • Genetics

Background:

  • Breast cancer remains a leading cause of cancer death in women, with unmet needs in diagnosis and treatment.
  • Long non-coding RNAs (lncRNAs) are implicated in tumor development, presenting potential therapeutic targets.
  • This study investigates lncRNA expression profiles to identify novel therapeutic targets for breast cancer.

Purpose of the Study:

  • To identify differentially expressed lncRNAs in breast cancer.
  • To investigate the functional role of the lncRNA ST8SIA6-AS1 in breast cancer.
  • To explore potential molecular mechanisms of ST8SIA6-AS1 in breast cancer progression.

Main Methods:

  • Competitive endogenous RNA (ceRNA) microarray analysis to profile lncRNAs.
  • Quantitative real-time polymerase chain reaction (qRT-PCR) to validate differentially expressed lncRNAs.
  • Cell function assays and bioinformatics analyses to elucidate ST8SIA6-AS1 function and interactions.

Main Results:

  • Seven lncRNAs, including ST8SIA6-AS1, were significantly upregulated in breast cancer tissues.
  • ST8SIA6-AS1 expression correlated with TNM staging and Ki-67 index.
  • ST8SIA6-AS1 promoted breast cancer cell proliferation, migration, and invasion in vitro.

Conclusions:

  • lncRNA ST8SIA6-AS1 promotes breast cancer cell proliferation, migration, and invasion.
  • ST8SIA6-AS1 may contribute to breast cancer progression via the miR-4252 pathway or interaction with RNA binding proteins (NONO, QKI, RBMX).
  • ST8SIA6-AS1 represents a potential therapeutic target for breast cancer.

Related Concept Videos

lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA...
9.5K
lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

3.2K
siRNA - Small Interfering RNAs02:30

siRNA - Small Interfering RNAs

Small interfering RNAs, or siRNAs, are short regulatory RNA molecules that can silence genes post-transcriptionally, as well as the transcriptional level in some cases. siRNAs are important for protecting cells against viral infections and silencing transposable genetic elements.
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...
18.0K
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
3.5K
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After...
23.5K
Ribosome Profiling02:24

Ribosome Profiling

Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
3.9K