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Profiling of specific long non-coding RNA signatures identifies ST8SIA6-AS1 AS a novel target for breast cancer
Zhanghan Chen1, Jie Huang1, Yanling Feng2
1Department of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, China.
Background:
Breast cancer is the most commonly diagnosed cancer among women and is also the leading cause of cancer death for which the treatment and methods of diagnosis remain unsatisfied. Long non-coding RNA (lncRNA) plays an important role in the occurrence and development of tumors, including breast cancer. We aimed to seek new and efficient treatment targets by analyzing the lncRNA expression profiles of breast cancer.
Methods:
A competitive endogenous RNA microarray was used to investigate the profiles of differentially expressed lncRNAs. Quantitative real-time polymerase chain reaction analysis (qRT-PCR) validated the top differentially expressed lncRNAs in 107 pairs of breast cancer tissues and adjacent normal tissues. cis- and trans-regulation mRNAs of lncRNAs were used to perform enrichment analysis. Cell function assays were used to explore the functions of ST8SIA6-AS1.
Results:
Seven lncRNAs, comprising ST8SIA6-AS1, lnc-HIST1H2BJ-5:1, lnc-PRICKLE2-3:2, RP1-86C11.7, RP11-15F12.1, ZNF670-ZNF695 and lnc-STRN3-12:1, were shown to be significantly up-regulated in breast cancer. lncRNA ST8SIA6-AS1 was associated with TNM staging and Ki-67 index. The cell function assays showed that ST8SIA6-AS1 can promote the proliferation, migration and invasion of breast cancer cells. The functions of ST8SIA6-AS1 were explored and the competing endogenous RNA mode showed that miR-4252 was a potential candidate. Its target genes were further predicted. The lncRNA-protein mode showed three potential candidate RNA binding proteins: NONO, QKI and RBMX.
Conclusions:
lncRNA ST8SIA6-AS1 can promote the proliferation, migration and invasion of breast cancer cells. By hypothesizing two different functional modes of ST8SIA6-AS1, we found lncRNA ST8SIA6-AS1 may contribute to breast cancer progression through miR-4252 or interacting with RNA binding proteins: NONO, QKI and RBMX.
Insights
Long non-coding RNA ST8SIA6-AS1 promotes breast cancer progression by enhancing cell proliferation, migration, and invasion. This study identifies ST8SIA6-AS1 as a potential therapeutic target for breast cancer treatment.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Breast cancer remains a leading cause of cancer death in women, with unmet needs in diagnosis and treatment.
- Long non-coding RNAs (lncRNAs) are implicated in tumor development, presenting potential therapeutic targets.
- This study investigates lncRNA expression profiles to identify novel therapeutic targets for breast cancer.
Purpose of the Study:
- To identify differentially expressed lncRNAs in breast cancer.
- To investigate the functional role of the lncRNA ST8SIA6-AS1 in breast cancer.
- To explore potential molecular mechanisms of ST8SIA6-AS1 in breast cancer progression.
Main Methods:
- Competitive endogenous RNA (ceRNA) microarray analysis to profile lncRNAs.
- Quantitative real-time polymerase chain reaction (qRT-PCR) to validate differentially expressed lncRNAs.
- Cell function assays and bioinformatics analyses to elucidate ST8SIA6-AS1 function and interactions.
Main Results:
- Seven lncRNAs, including ST8SIA6-AS1, were significantly upregulated in breast cancer tissues.
- ST8SIA6-AS1 expression correlated with TNM staging and Ki-67 index.
- ST8SIA6-AS1 promoted breast cancer cell proliferation, migration, and invasion in vitro.
Conclusions:
- lncRNA ST8SIA6-AS1 promotes breast cancer cell proliferation, migration, and invasion.
- ST8SIA6-AS1 may contribute to breast cancer progression via the miR-4252 pathway or interaction with RNA binding proteins (NONO, QKI, RBMX).
- ST8SIA6-AS1 represents a potential therapeutic target for breast cancer.
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