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Characterization at the Molecular Level using Robust Biochemical Approaches of a New Kinase Protein
Published on: June 30, 2019
Development and characterization of protein kinase B/AKT isoform-specific nanobodies
Tijs Merckaert1,2, Olivier Zwaenepoel1, Kris Gevaert1,2
1Department of Biomolecular Medicine, Faculty of Medicine and Health Sciences, Ghent University, Ghent, Belgium.
Abstract:
The serine/threonine protein kinase AKT is frequently over-activated in cancer and is associated with poor prognosis. As a central node in the PI3K/AKT/mTOR pathway, which regulates various processes considered to be hallmarks of cancer, this kinase has become a prime target for cancer therapy. However, AKT has proven to be a highly complex target as it comes in three isoforms (AKT1, AKT2 and AKT3) which are highly homologous, yet non-redundant. The isoform-specific functions of the AKT kinases can be dependent on context (i.e. different types of cancer) and even opposed to one another. To date, there is no isoform-specific inhibitor available and no alternative to genetic approaches to study the function of a single AKT isoform. We have developed and characterized nanobodies that specifically interact with the AKT1 or AKT2 isoforms. These new tools should enable future studies of AKT1 and AKT2 isoform-specific functions. Furthermore, for both isoforms we obtained a nanobody that interferes with the AKT-PIP3-interaction, an essential step in the activation of the kinase. The nanobodies characterized in this study are a new stepping stone towards unravelling AKT isoform-specific signalling.
Insights
New nanobodies target specific AKT kinase isoforms (AKT1, AKT2), crucial for cancer. These tools aid research into isoform-specific functions and AKT-PIP3 interactions, advancing cancer therapy development.
Area of Science:
- Biochemistry
- Molecular Biology
- Cancer Research
Background:
- Serine/threonine protein kinase AKT is over-activated in cancer, correlating with poor prognosis.
- AKT is a key regulator in the PI3K/AKT/mTOR pathway, a hallmark of cancer.
- AKT has three highly homologous but non-redundant isoforms (AKT1, AKT2, AKT3) with context-dependent functions.
Purpose of the Study:
- To develop novel tools for studying AKT isoform-specific functions.
- To create isoform-specific inhibitors for AKT1 and AKT2.
- To investigate the AKT-PIP3 interaction using targeted nanobodies.
Main Methods:
- Development and characterization of nanobodies targeting AKT1 and AKT2.
- Assessment of nanobody interaction with specific AKT isoforms.
- Evaluation of nanobodies' ability to inhibit AKT-PIP3 interaction.
Main Results:
- Successfully developed and characterized nanobodies specific to AKT1 and AKT2.
- Obtained nanobodies that interfere with the essential AKT-PIP3 interaction for both isoforms.
- Demonstrated the potential of nanobodies as tools for isoform-specific AKT research.
Conclusions:
- Nanobodies offer a non-genetic approach to study AKT1 and AKT2 isoform-specific functions.
- These nanobodies are valuable tools for understanding AKT signaling in cancer.
- The developed nanobodies represent a step towards targeted cancer therapies by enabling deeper insights into AKT isoform activity.
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