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PheWAS-ME: a web-app for interactive exploration of multimorbidity patterns in PheWAS
Nick Strayer1, Jana K Shirey-Rice2, Yu Shyr1
1Department of Biostatistics, Vanderbilt University, Nashville, TN 37203, USA.
Bioinformatics (Oxford, England)
|October 14, 2020
Summary
PheWAS-ME is a new interactive dashboard that helps researchers explore complex gene-disease associations by visualizing genetic data alongside electronic health records. This tool aids in understanding multimorbidity patterns and their link to genetic variants.
Area of Science:
- Genomics and Bioinformatics
- Computational Biology
- Precision Medicine
Background:
- Electronic health records (EHRs) linked with DNA biobanks offer significant potential for biomedical research.
- Phenome-wide association studies (PheWAS) analyze genetic variants against clinical phenotypes in EHRs.
- Interpreting complex gene-disease associations, especially those involving comorbidities, is challenging with static PheWAS results.
Purpose of the Study:
- To introduce PheWAS-ME, an interactive dashboard for visualizing individual-level genotype and phenotype data alongside PheWAS results.
- To enable researchers to explore multimorbidity patterns and their associations with specific genetic variants.
- To enhance PheWAS analyses by providing tools for deeper investigation of clinical data.
Main Methods:
- Development of an interactive dashboard (PheWAS-ME) integrating genotype, phenotype, and PheWAS data.
- Side-by-side visualization of individual-level data and PheWAS summary statistics.
- Facilitation of exploration for multimorbidity patterns related to genetic variants.
Main Results:
- PheWAS-ME allows for the visualization of individual-level genotype and phenotype data.
- The dashboard facilitates the exploration of multimorbidity patterns within PheWAS analyses.
- Researchers can investigate associations between genetic variants and complex disease patterns.
Conclusions:
- PheWAS-ME enriches PheWAS analyses by providing interactive visualization of complex genetic and clinical data.
- The tool aids in understanding the influence of multimorbidity on gene-disease associations.
- This approach is expected to advance precision medicine research by illuminating intricate biological relationships.
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