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Artificial Intelligence (AI) to the Rescue: Deploying Machine Learning to Bridge the Biorelevance Gap in Antioxidant
Sunday Olakunle Idowu1, Amos Akintayo Fatokun2
1Laboratory for Pharmaceutical Profiling & Informatics, Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Ibadan, Ibadan, Oyo, Nigeria.
Abstract:
Oxidative stress induced by excessive levels of reactive oxygen species (ROS) underlies several diseases. Therapeutic strategies to combat oxidative damage are, therefore, a subject of intense scientific investigation to prevent and treat such diseases, with the use of phytochemical antioxidants, especially polyphenols, being a major part. Polyphenols, however, exhibit structural diversity that determines different mechanisms of antioxidant action, such as hydrogen atom transfer (HAT) and single-electron transfer (SET). They also suffer from inadequate in vivo bioavailability, with their antioxidant bioactivity governed by permeability, gut-wall and first-pass metabolism, and HAT-based ROS trapping. Unfortunately, no current antioxidant assay captures these multiple dimensions to be sufficiently "biorelevant," because the assays tend to be unidimensional, whereas biorelevance requires integration of several inputs. Finding a method to reliably evaluate the antioxidant capacity of these phytochemicals, therefore, remains an unmet need. To address this deficiency, we propose using artificial intelligence (AI)-based machine learning (ML) to relate a polyphenol's antioxidant action as the output variable to molecular descriptors (factors governing in vivo antioxidant activity) as input variables, in the context of a biomarker selectively produced by lipid peroxidation (a consequence of oxidative stress), for example F2-isoprostanes. Support vector machines, artificial neural networks, and Bayesian probabilistic learning are some key algorithms that could be deployed. Such a model will represent a robust predictive tool in assessing biorelevant antioxidant capacity of polyphenols, and thus facilitate the identification or design of antioxidant molecules. The approach will also help to fulfill the principles of the 3Rs (replacement, reduction, and refinement) in using animals in biomedical research.
Insights
Developing a biorelevant antioxidant assay is crucial for understanding polyphenol efficacy. Artificial intelligence (AI) and machine learning (ML) can predict polyphenol antioxidant capacity, aiding in the discovery of new therapeutic compounds.
Area of Science:
- Biochemistry
- Pharmacology
- Computational Biology
Background:
- Oxidative stress from reactive oxygen species (ROS) contributes to various diseases.
- Phytochemical antioxidants, particularly polyphenols, are investigated for therapeutic potential.
- Current antioxidant assays lack biorelevance, failing to capture in vivo complexities like bioavailability and metabolism.
Purpose of the Study:
- To address the unmet need for a biorelevant method to evaluate polyphenol antioxidant capacity.
- To develop a predictive model for assessing the in vivo antioxidant activity of polyphenols.
- To facilitate the identification and design of effective antioxidant molecules.
Main Methods:
- Utilizing artificial intelligence (AI) and machine learning (ML) algorithms.
- Relating molecular descriptors (inputs) to polyphenol antioxidant action (output).
- Employing biomarkers like F2-isoprostanes, indicative of lipid peroxidation.
Main Results:
- Proposed AI/ML models (e.g., SVM, ANN, Bayesian learning) can predict biorelevant antioxidant capacity.
- The approach offers a robust predictive tool for evaluating phytochemicals.
- This method aligns with the 3Rs principles for animal research.
Conclusions:
- AI/ML offers a novel approach to assess the biorelevant antioxidant capacity of polyphenols.
- This predictive modeling can accelerate the discovery of new antioxidant therapeutics.
- The strategy enhances the evaluation of phytochemicals for disease prevention and treatment.

