Contributions of Histone Variants in Nucleosome Structure and Function
Hitoshi Kurumizaka1, Tomoya Kujirai1, Yoshimasa Takizawa1
1Laboratory of Chromatin Structure and Function, Institute for Quantitative Biosciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-0032, Japan.
Journal of Molecular Biology
|October 16, 2020
Summary
Histone variants create diverse nucleosomes, essential for the epigenetic regulation of chromatin structure and function in eukaryotes. This review explores these nucleosome types and their roles.
Area of Science:
- Molecular Biology
- Epigenetics
- Genomics
Background:
- Chromatin, the complex of DNA and proteins, compacts eukaryotic genomes.
- The nucleosome, comprising core histones (H2A, H2B, H3, H4) and DNA, is the fundamental unit of chromatin.
- Nucleosome structure and dynamics are crucial for DNA-templated processes like replication, repair, and transcription.
Purpose of the Study:
- To review the diverse types of nucleosomes formed by histone variants.
- To highlight the role of histone variants in epigenetic regulation.
- To discuss how nucleosome diversity impacts chromatin function.
Main Methods:
- Literature review of studies on histone variants and nucleosome structure.
- Analysis of the functional implications of different nucleosome compositions.
- Synthesis of current knowledge on epigenetic mechanisms involving histone variants.
Main Results:
- Histone variants, as non-allelic isoforms, generate significant nucleosome diversity in higher eukaryotes.
- This diversity allows for specialized nucleosome functions beyond basic DNA packaging.
- Histone variants are integral to the epigenetic control of gene expression and other DNA-related processes.
Conclusions:
- Histone variants are key determinants of nucleosome heterogeneity.
- Nucleosome diversity mediated by histone variants is fundamental to epigenetic regulation.
- Understanding these variants is crucial for comprehending chromatin dynamics and genomic regulation.
Related Concept Videos
The Nucleosome Core Particle
2.0K
Nucleosomes are the DNA-histone complex, where the DNA strand is wound around the histone core. The histone core is an octamer containing two copies of H2A, H2B, H3, and H4 histone proteins.
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
2.0K
The Nucleosome Core Particle
13.7K
Nucleosomes are the DNA-histone complex, where the DNA strand is wound around the histone core. The histone core is an octamer containing two copies of H2A, H2B, H3, and H4 histone proteins.
The paradox
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their main responsibility is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. While on the other hand, they must allow polymerase enzymes to access DNA...
The paradox
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their main responsibility is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. While on the other hand, they must allow polymerase enzymes to access DNA...
13.7K
Histone Variants at the Centromere
4.8K
Histone variants are the histone proteins with structural and sequence variations. These variants may be regarded as “mutant” forms that replace their canonical histone counterparts in the nucleosomes. Specific post-translational modifications on the histone variants enable further chromatin complexity and regulate tissue-specific gene expression. The most common histone variants are from histone H2A, H2B, and linker histone H1 families. However, several variants of histone H3...
4.8K
Histone Modification
15.4K
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
15.4K
Histone Modification
4.1K
4.1K
The Nucleosome
3.4K
Human DNA is almost two meters long. However, it is compressed inside a tiny nucleus measuring only a few microns in diameter. To make this degree of compaction possible, DNA is organized into several sequential levels so that it can fit into such a tiny space. The most compact form of DNA is a chromosome that can be seen under a microscope in a dividing cell.
In a chromosome, DNA is wound twice around a protein complex called a histone octamer core, which consists of 8 histone proteins. This...
In a chromosome, DNA is wound twice around a protein complex called a histone octamer core, which consists of 8 histone proteins. This...
3.4K


