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A SEMIPARAMETRIC MODELING APPROACH USING BAYESIAN ADDITIVE REGRESSION TREES WITH AN APPLICATION TO EVALUATE
Bret Zeldow1, Vincent Lo Re2, Jason Roy3
1Department of Health Care Policy, Harvard Medical School, 180 Longwood Ave, Boston, Massachusetts 02115, USA.
This study introduces a semiparametric Bayesian Additive Regression Trees (BART) model for flexible regression analysis. The new semiparametric BART approach enhances causal inference and controls for confounders effectively.
Area of Science:
- Statistics
- Machine Learning
- Biostatistics
Background:
- Bayesian Additive Regression Trees (BART) is a powerful machine learning algorithm for modeling complex relationships.
- Existing BART methods may not adequately handle situations requiring specific modeling of treatment effects and confounders.
Purpose of the Study:
- To extend BART to a semiparametric regression framework for improved causal inference.
- To develop a Bayesian semiparametric linear regression model that allows for unspecified functional forms of confounders while maintaining a linear form for treatment and effect modifiers.
Main Methods:
- Developed a semiparametric extension of BART.
- Integrated a linear component for treatment and effect modifiers with a flexible component for confounders.
- The model allows for interpretable posterior distributions for the linear parameters, akin to parametric Bayesian regression.
Main Results:
- The proposed semiparametric BART model effectively captures nonlinearities and interactions.
- Demonstrated utility in causal modeling, potentially serving as a Bayesian Structural Mean Model (SMM).
- Validated through simulation studies and an application to HIV/Hepatitis C coinfection data.
Conclusions:
- The semiparametric BART framework offers a flexible and interpretable approach for regression and causal inference.
- The `semibart` R package provides practical implementation of these advanced statistical methods.
- This method is particularly useful when controlling for nuisance variables while focusing on specific variables of interest.
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