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Easing diagnosis and pushing the detection limits of SARS-CoV-2
Uday Kiran1,2, C G Gokulan1, Santosh Kumar Kuncha1,2
1CSIR-Centre for Cellular and Molecular Biology (CSIR-CCMB), Hyderabad, India.
Biology Methods & Protocols
|October 19, 2020
Summary
A simplified reverse transcription-polymerase chain reaction (RT-PCR) test for severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2) is faster, cheaper, and as accurate as the traditional method. This optimized testing approach is ideal for mass screening during the coronavirus disease 2019 pandemic.
Area of Science:
- Molecular Biology
- Virology
- Medical Diagnostics
Background:
- The coronavirus disease 2019 (COVID-19) pandemic necessitates rapid and accurate diagnostic testing.
- Current reverse transcription-polymerase chain reaction (RT-PCR) methods for detecting severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2) are reliable but can be time-consuming and costly.
Purpose of the Study:
- To develop a simplified, faster, safer, and more economical RT-PCR procedure for SARS-CoV-2 detection.
- To evaluate the accuracy and efficiency of the modified method compared to the traditional approach.
Main Methods:
- Elimination of the RNA isolation step from the standard RT-PCR protocol for SARS-CoV-2 detection.
- Development and validation of a modified RT-PCR assay.
- Comparative analysis of the modified method against the conventional RT-PCR procedure.
Main Results:
- The simplified RT-PCR method significantly reduces testing time by approximately 50%.
- The modified procedure is approximately 40% cheaper than the traditional method.
- A variant of the new method demonstrated a 30% increase in detection efficiency.
- The simplified method maintains accuracy comparable to the traditional RT-PCR test.
Conclusions:
- The optimized RT-PCR method offers a faster, more economical, and equally accurate alternative for SARS-CoV-2 detection.
- This simplified approach is suitable for large-scale screening efforts to combat the COVID-19 pandemic.
- The enhanced detection efficiency variant provides a further improvement for reliable SARS-CoV-2 diagnosis.

