Identification of AR-V7 downstream genes commonly targeted by AR/AR-V7 and specifically targeted by AR-V7 in
Masahiro Sugiura1, Hiroaki Sato1, Atsushi Okabe2
1Department of Urology, Graduate School of Medicine, Chiba University, Chiba, Japan; Department of Molecular Oncology, Graduate School of Medicine, Chiba University, Inohana 1-8-1, Chuo-ku, Chiba, Japan.
Abstract:
Primary prostate cancer (PC) progresses to castration-resistant PC (CRPC) under androgen deprivation therapy, by mechanisms e.g. expression of androgen receptor (AR) splice variant-7 (AR-V7). Here we conducted comprehensive epigenome and transcriptome analyses comparing LNCaP, primary PC cells, and LNCaP95, AR-V7-expressing CRPC cells derived from LNCaP. Of 399 AR-V7 target regions identified through ChIP-seq analysis, 377 could be commonly targeted by hormone-stimulated AR, and 22 were specifically targeted by AR-V7. Among genes neighboring to these AR-V7 target regions, 78 genes were highly expressed in LNCaP95, while AR-V7 knockdown led to significant repression of these genes and suppression of growth of LNCaP95. Of the 78 AR-V7 target genes, 74 were common AR/AR-V7 target genes and 4 were specific AR-V7 target genes; their most suppressed genes by AR-V7 knockdown were NUP210 and SLC3A2, respectively, and underwent subsequent analyses. NUP210 and SLC3A2 were significantly upregulated in clinical CRPC tissues, and their knockdown resulted in significant suppression of cellular growth of LNCaP95 through apoptosis and growth arrest. Collectively, AR-V7 contributes to CRPC proliferation by activating both common AR/AR-V7 target and specific AR-V7 target, e.g. NUP210 and SLC3A2.
Insights
Androgen receptor variant 7 (AR-V7) drives castration-resistant prostate cancer (CRPC) progression by activating target genes, including NUP210 and SLC3A2. Silencing these genes suppresses CRPC cell growth, offering potential therapeutic targets.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Prostate cancer (PC) can become castration-resistant (CRPC) during treatment.
- Androgen receptor (AR) splice variant 7 (AR-V7) expression is a mechanism for CRPC development.
Purpose of the Study:
- To investigate the role of AR-V7 in CRPC progression.
- To identify AR-V7 target genes and their impact on CRPC cell growth.
Main Methods:
- Comparative epigenome and transcriptome analyses of PC and CRPC cell lines.
- Chromatin immunoprecipitation sequencing (ChIP-seq) to identify AR-V7 target regions.
- Gene knockdown experiments and cell growth assays.
Main Results:
- Identified 399 AR-V7 target regions, with 22 specifically bound by AR-V7.
- Found 78 genes near AR-V7 targets highly expressed in CRPC cells; AR-V7 knockdown repressed these genes and suppressed LNCaP95 cell growth.
- Upregulated NUP210 and SLC3A2 in CRPC tissues; their knockdown inhibited LNCaP95 cell growth via apoptosis and arrest.
Conclusions:
- AR-V7 promotes CRPC proliferation by regulating both common and specific target genes.
- NUP210 and SLC3A2 are key AR-V7 targets that contribute to CRPC growth and represent potential therapeutic targets.
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