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Updated: Dec 3, 2025

Modeling the Functional Network for Spatial Navigation in the Human Brain
Published on: October 13, 2023
Challenges and future directions for representations of functional brain organization
Janine Bijsterbosch1,2, Samuel J Harrison3,4, Saad Jbabdi3
1Mallinckrodt Institute of Radiology, Washington University in St Louis, Saint Louis, MO, USA. Janine.Bijsterbosch@wustl.edu.
This primer explores brain representations derived from functional MRI (fMRI) resting-state scans. It addresses how diverse analysis methods fragment research and proposes guidelines to unify the field for better replication and clinical translation.
Area of Science:
- Neuroscience
- Cognitive Science
- Medical Imaging
Background:
- Brain organization relies on functional integration within interconnected networks.
- Resting-state functional MRI (fMRI) reveals functional connectivity through coherent spontaneous activity fluctuations.
- Current research is fragmented due to diverse analytical approaches, hindering replication and clinical translation.
Purpose of the Study:
- To provide an overview of various brain representations derived from fMRI data.
- To identify challenges causing field fractionation and obstacles to convergence.
- To propose guidelines for unifying the field of functional connectivity research.
Main Methods:
- Review and synthesis of existing literature on brain representations.
- Analysis of diverging methodologies in functional connectivity analysis.
- Identification of common challenges and limitations across different approaches.
Main Results:
- Diverse methods for reducing complex brain data into lower-dimensional 'brain representations' are a primary source of field fractionation.
- Existing analytical disparities create research silos, impeding scientific progress and clinical applications.
- A lack of standardized approaches hinders the comparison and integration of findings across studies.
Conclusions:
- Standardizing brain representation methods is crucial for advancing functional connectivity research.
- Guidelines are proposed to foster convergence and facilitate replication and clinical translation.
- Unifying the field will enhance our understanding of brain networks in cognition and disease.
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