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hnRNPH2 as an Inhibitor of Chicken MDA5-Mediated Type I Interferon Response: Analysis Using Chicken MDA5-Host
Xian Lin1,2,3, Shiman Yu1,2, Haiying Mao1,2
1State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, China.
Abstract:
RIG-I and MDA5 are two key pattern recognition receptors that sense the invasion of RNA viruses and initiate type I interferon (IFN) response. Although these receptors are generally conserved in vertebrates, RIG-I is absent in chickens, whereas MDA5 is present. Chicken MDA5 (chMDA5) plays a pivotal role in sensing the invasion of RNA viruses into cells. However, unlike mammalian MDA5, where there are in-depth and extensive studies, regulation of the chMDA5-mediated signaling pathway remains unexplored. In this study, we performed a pulldown assay and mass spectrometry analysis to identify chicken proteins that could interact with the N terminal of chMDA5 (chMDA5-N) that contained two CARDs responsible for binding of the well-known downstream adaptor MAVS. We found that 337 host proteins could potentially interact with chMDA5-N, which were integrated to build a chMDA5-N-host association network and analyzed by KEGG pathway and Gene Ontology annotation. Results of our analysis revealed that diverse cellular processes, such as RNA binding and transport and protein translation, ribosome, chaperones, and proteasomes are critical cellular factors regulating the chMDA5-mediated signaling pathway. We cloned 64 chicken genes to investigate their effects on chMDA5-mediated chicken IFN-β production and confirmed the association of chicken DDX5, HSPA8, HSP79, IFIT5, PRDX1, and hnRNPH2 with chMDA5-N. In particular, we found that chicken hnRNPH2 impairs the association between chMDA5-N and MAVS and thus acts as a check on the chMDA5-mediated signaling pathway. To our knowledge, this study is the first to analyze the chicken MDA5-host interactome, which provides fundamental but significant insights to further explore the mechanism of chicken MDA5 signaling regulation in detail.
Insights
Chicken MDA5 (chMDA5) is crucial for antiviral defense. This study identified 337 host proteins interacting with chMDA5, revealing key cellular processes and finding hnRNPH2 acts as a negative regulator of the chMDA5 signaling pathway.
Area of Science:
- Immunology
- Virology
- Molecular Biology
Background:
- RIG-I and MDA5 are pattern recognition receptors sensing RNA viruses and initiating type I interferon response.
- Chicken MDA5 (chMDA5) is present and vital for sensing RNA viruses, but its signaling pathway regulation is unexplored.
- Mammalian MDA5 has been extensively studied, highlighting a knowledge gap in avian systems.
Purpose of the Study:
- To identify chicken proteins interacting with the N-terminal domain of chMDA5 (chMDA5-N).
- To construct a chMDA5-N-host association network and analyze its functional implications.
- To investigate the regulatory mechanisms of the chMDA5-mediated signaling pathway in chickens.
Main Methods:
- Pulldown assay and mass spectrometry to identify chMDA5-N interacting proteins.
- KEGG pathway and Gene Ontology annotation for network analysis.
- Cloning and functional analysis of 64 candidate chicken genes for their effect on IFN-β production.
Main Results:
- Identified 337 potential host proteins interacting with chMDA5-N, revealing involvement of RNA binding, transport, and protein translation pathways.
- Confirmed interactions between chMDA5-N and specific chicken proteins including DDX5, HSPA8, HSP79, IFIT5, PRDX1, and hnRNPH2.
- Demonstrated that chicken hnRNPH2 negatively regulates chMDA5 signaling by impairing chMDA5-N and MAVS association.
Conclusions:
- This study presents the first comprehensive analysis of the chicken MDA5-host interactome.
- Identified critical cellular factors and pathways regulating chMDA5 signaling.
- Discovered hnRNPH2 as a novel negative regulator of the chMDA5-mediated signaling pathway, providing insights into avian antiviral immunity.
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