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Updated: Dec 3, 2025

Semiconductor Sequencing for Preimplantation Genetic Testing for Aneuploidy
Published on: August 25, 2019
Exploring the predicted yield of prenatal testing by evaluating a postnatal population with structural abnormalities
Peyton B Nunley1,2, Syed S Hashmi3, Anthony Johnson3,4
1Department of Obstetrics and Gynecology, University of South Carolina School of Medicine, Columbia, South Carolina, USA.
Chromosomal microarray (CMA) offers the highest diagnostic yield for fetal structural abnormalities. Expanded non-invasive prenatal testing (NIPT) shows promise for patients avoiding invasive procedures, with proper counseling.
Area of Science:
- Medical Genetics
- Prenatal Diagnostics
- Bioinformatics
Background:
- Fetal structural abnormalities are often associated with genetic aberrations.
- Accurate prenatal testing is crucial for diagnosis and management.
- Predicting the diagnostic yield of various genetic tests is essential for informed decision-making.
Purpose of the Study:
- To evaluate the diagnostic yield of prenatal testing and screening options for fetal structural abnormalities.
- To introduce and apply a novel mathematical model for yield prediction.
- To compare the efficacy of different genetic testing modalities.
Main Methods:
- Retrospective chart review of infants with structural abnormalities.
- Collection of genetic testing data.
- Application of a novel mathematical model to predict diagnostic yields.
Main Results:
- Over a quarter (28.1%) of patients with structural abnormalities had an identified genetic aberration.
- Chromosomal microarray (CMA) demonstrated the highest predicted diagnostic yield (26.8%).
- Genome-wide non-invasive prenatal testing (NIPT) and karyotype showed similar yields; whole exome sequencing was effective for isolated abnormalities.
Conclusions:
- A novel mathematical model can predict the yield of prenatal genetic testing.
- CMA is the most effective diagnostic tool for fetal structural abnormalities.
- Expanded NIPT options present a viable alternative to invasive testing when accompanied by thorough pre-test counseling.
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