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Updated: Dec 2, 2025

Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS
Published on: July 11, 2016
Rapid identification of Nocardia cyriacigeorgica from a brain abscess patient using MALDI-TOF-MS
Mohammed AlMogbel1, Mohammed AlBolbol2, Noura Elkhizzi3
1Molecular Diagnostic and Personalized Therapeutics unit, College of Applied Medical Sciences, University of Ha'il, Ha'il, Kingdom of Saudi Arabia.
Abstract:
Nocardia cyriacigeorgica (N. cyriacigeorgica) is most frequently associated with human infections, including chronic bronchitis, pulmonary disease and brain abscesses. In general, N. cyriacigeorgica causes infections in immunocompromised individuals and has been reported in clinical samples worldwide. However, the isolation and speciation of N. cyriacigeorgica in the routine diagnostic microbiology laboratory are complicated and time consuming. Recent mass spectrometry techniques such as matrix-assisted laser desorption/ionization time-of-flight-mass spectrometry (MALDI-TOF-MS) have been successfully integrated into many routine diagnostic microbiology laboratories, allowing for the rapid, accurate and simple identification and speciation of many different microorganisms, including difficult-to-identify bacterial species. Here, we present a case report of a 65-year-old female patient from the neurology ward of Prince Sultan Military Medical City in Riyadh, Saudi Arabia, who was infected with N. cyriacigeorgica. The bacterium was successfully identified by MALDI-TOF-MS, with species identification subsequently confirmed by sequence analysis of the 16S ribosomal RNA.
Insights
Nocardia cyriacigeorgica infections are challenging to diagnose. Matrix-assisted laser desorption/ionization-time of flight-mass spectrometry (MALDI-TOF-MS) offers a rapid and accurate method for identifying this bacterium in clinical settings.
Area of Science:
- Medical Microbiology
- Infectious Diseases
Background:
- Nocardia cyriacigeorgica is a pathogen often causing severe infections in immunocompromised individuals.
- Traditional methods for isolating and identifying N. cyriacigeorgica in diagnostic labs are time-consuming and complex.
Observation:
- A case of Nocardia cyriacigeorgica infection in a 65-year-old female patient is reported.
- The bacterium was isolated from a patient in a neurology ward in Riyadh, Saudi Arabia.
Findings:
- Matrix-assisted laser desorption/ionization-time of flight-mass spectrometry (MALDI-TOF-MS) rapidly and accurately identified N. cyriacigeorgica.
- Species identification was confirmed using 16S ribosomal RNA sequence analysis.
Implications:
- MALDI-TOF-MS integration can significantly improve the diagnostic workflow for Nocardia infections.
- This technology aids in the timely identification of difficult-to-identify bacterial species, enhancing patient care.
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