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Updated: Dec 2, 2025

3D Culturing of Organoids from the Intestinal Villi Epithelium Undergoing Dedifferentiation
Published on: April 1, 2021
Mitochondria Define Intestinal Stem Cell Differentiation Downstream of a FOXO/Notch Axis
Marlies C Ludikhuize1, Maaike Meerlo1, Marc Pages Gallego1
1Molecular Cancer Research, Center Molecular Medicine, University Medical Center Utrecht, Heidelberglaan 100, 3584 CG Utrecht, the Netherlands.
Forkhead box O (FoxO) and Notch signaling regulate intestinal stem cell differentiation by controlling mitochondrial activity. This discovery reveals a novel signaling-metabolic pathway crucial for cell fate determination.
Area of Science:
- Cell Biology
- Developmental Biology
- Metabolism
Background:
- WNT and Notch signaling pathways control intestinal stem cell differentiation.
- Mitochondrial activity differs between intestinal stem cells and differentiated Paneth cells, suggesting a metabolic shift during differentiation.
Purpose of the Study:
- To investigate the interaction between Forkhead box O (FoxO) transcription factors, Notch signaling, and mitochondrial activity in regulating Lgr5+ crypt-based columnar cell (CBC) differentiation.
- To elucidate the role of mitochondria in the metabolic transition during CBC differentiation into secretory lineages.
Main Methods:
- Organoid culture and mouse intestinal models.
- Deletion of Foxo1/3/4 genes.
- Single-cell RNA sequencing (scRNA-seq) to reconstruct differentiation trajectories.
Main Results:
- FoxO transcription factors and Notch signaling interact to determine CBC fate.
- Deletion of Foxo1/3/4 in mice promotes secretory cell differentiation.
- FOXO and Notch signaling converge on regulating mitochondrial fission, driving stem cell differentiation into goblet cells and Paneth cells.
- scRNA-seq data supports the involvement of FOXO, Notch, and mitochondria in secretory differentiation.
Conclusions:
- A novel signaling-metabolic axis involving FOXO, Notch, and mitochondria regulates intestinal stem cell differentiation.
- Mitochondrial dynamics play a critical role in determining stem cell fate and lineage commitment.
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