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In this lesson, we delve into the role of ring conformation and its stability, which determines the spatial arrangement and, consequently, the molecular symmetry and stereoisomerism of cyclic compounds. 1,2-Dimethylcyclohexane is used as a case study to evaluate the possible number of stereoisomers. Here, given the multiple (n = 2) chiral centers, there are 2n = 4 possible configurations that lack a plane of symmetry, as the ring skeleton exists in a non-planar chair conformation. In addition,...
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The concept of prochirality leads to the nomenclature of the individual faces of a molecule and plays a crucial role in the enantioselective reaction. It is a concept where two or more achiral molecules react to produce chiral products. A typical process is the reaction of an achiral ketone to generate a chiral alcohol. Here, the achiral reactant reacts with an achiral reducing agent, sodium borohydride, to generate an equimolar mixture of the chiral enantiomers of the product. For example, an...
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Stability of Substituted Cyclohexanes02:30

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This lesson discusses the stability of substituted cyclohexanes with a focus on energies of various conformers and the effect of 1,3-diaxial interactions.
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Chair Conformation of Cyclohexane02:02

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The chair conformation is the most stable form of cyclohexane due to the absence of angle and torsional strain. The absence of angle strain is a result of cyclohexane’s bond angle being very close to the ideal tetrahedral bond angle of 109.5° in its chair conformer. Similarly, the torsional strain is also absent owing to the perfectly staggered arrangement of bonds.
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Depending upon the different spatial orientation of the substituents, the disubstituted cycloalkanes exhibit two types of stereoisomers. The cis isomers have the substituents on the same side of the ring, whereas the trans isomers have the substituents on the opposite sides. These stereoisomers exhibit different physical properties and cannot be interconverted without breaking the carbon-carbon bonds.
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Cycloheptatriene is a neutral monocyclic unsaturated hydrocarbon that consists of an odd number of carbon atoms and an intervening sp3 carbon in the ring. The three double bonds in the ring correspond to 6 π electrons, which is a Huckel number, and therefore satisfies the criteria of 4n + 2 π electrons. However, the intervening sp3 carbon disrupts the continuous overlap of p orbitals. As a result, cycloheptatriene is not aromatic.
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Dynamic chiral cyclohexanohemicucurbit[12]uril.

Kamini A Mishra1, Jasper Adamson2, Mario Öeren3

  • 1Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, Estonia. riina.aav@taltech.ee.

Chemical Communications (Cambridge, England)
|November 6, 2020
PubMed
Summary

Chiral cyclohexanohemicucurbit[12]uril exhibits an octagonal shape with two flexibilities. Above 265 K, methylene bridges flip; above 308 K, urea monomers rotate, altering the macrocycle

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Area of Science:

  • Supramolecular Chemistry
  • Computational Chemistry
  • Physical Chemistry

Background:

  • Cyclic host molecules like cucurbiturils are crucial in supramolecular chemistry.
  • Understanding the conformational dynamics of macrocycles is key to their application.
  • Chiral variants offer unique possibilities in molecular recognition and catalysis.

Purpose of the Study:

  • To investigate the solution-state conformation and dynamics of chiral cyclohexanohemicucurbit[12]uril.
  • To elucidate the temperature-dependent structural changes and their impact on the macrocyclic cavity.
  • To combine experimental NMR data with theoretical DFT calculations for comprehensive analysis.

Main Methods:

  • Nuclear Magnetic Resonance (NMR) spectroscopy was employed to study the molecule in solution.
  • Density Functional Theory (DFT) modeling was used to predict and interpret structural and dynamic properties.
  • Variable-temperature NMR experiments were conducted to probe conformational transitions.

Main Results:

  • The macrocycle adopts a stable concave octagonal shape in solution.
  • Two distinct temperature-dependent conformational flexibilities were identified: methylene bridge flipping (above 265 K) and urea monomer rotation (above 308 K).
  • These dynamic processes lead to a loss of the confined space within the macrocycle at elevated temperatures.

Conclusions:

  • Chiral cyclohexanohemicucurbit[12]uril displays significant conformational flexibility in solution.
  • The identified dynamic transitions are critical for understanding its host-guest chemistry and potential applications.
  • The study provides fundamental insights into the behavior of complex macrocyclic structures.