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Diagnosing acute promyelocytic leukemia by using convolutional neural network.

Nengliang Ouyang1, Weijia Wang2, Li Ma3

  • 1Department of Laboratory Medicine, Zhongshan Hospital, Sun Yat-sen University, Zhongshan, PR China; Department of Laboratory Medicine, Nanfang Hospital, Southern Medical University, GuangZhou, PR China.

Clinica Chimica Acta; International Journal of Clinical Chemistry
|November 7, 2020
PubMed
Summary

Instance segmentation with Mask R-CNN accurately diagnoses acute promyelocytic leukemia (APL) in bone marrow images. Data augmentation and pre-trained models significantly improved diagnostic accuracy for APL detection.

Keywords:
Acute promyelocytic leukemiaBone marrow smearConvolutional neural networkDeep learningInstance segmentationLeukemia classificationLeukemia diagnosis

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Area of Science:

  • Medical Imaging
  • Computational Pathology
  • Artificial Intelligence in Medicine

Background:

  • Accurate diagnosis of acute promyelocytic leukemia (APL) is critical for effective treatment.
  • Traditional diagnostic methods for APL rely on expert interpretation of bone marrow smear images.
  • Developing automated systems can enhance diagnostic efficiency and consistency.

Purpose of the Study:

  • To evaluate the efficacy of instance segmentation using convolutional neural networks (CNNs) for diagnosing APL.
  • To assess the performance of Mask R-CNN in identifying and classifying nucleated cells in bone marrow smears.
  • To compare the diagnostic accuracy of models trained from scratch versus pre-trained and fine-tuned models.

Main Methods:

  • Utilized a dataset of 13,504 bone marrow smear images.
  • Employed the Mask R-CNN instance segmentation method for cell detection and classification.
  • Trained models from scratch and fine-tuned a pre-trained Mask R-CNN model on the dataset.
  • Applied data augmentation techniques to enhance model performance.
  • Developed diagnostic systems based on trained models and the French-American-British (FAB) Classification.

Main Results:

  • The best-performing model, an augmented pre-trained Mask R-CNN, achieved an average precision (AP) of 62.5% and an average recall (AR) of 84.1%.
  • The pre-trained model demonstrated significantly higher average precision than the model trained from scratch (P < 0.05).
  • Dataset augmentation further improved diagnostic accuracy (P < 0.03).

Conclusions:

  • Instance segmentation with Mask R-CNN shows potential for accurate APL diagnosis in bone marrow smear images.
  • A pre-trained approach combined with data augmentation significantly enhances diagnostic performance.
  • Deep learning offers a promising avenue for improving APL detection systems.