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Updated: Dec 1, 2025

Quantification and Whole Genome Characterization of SARS-CoV-2 RNA in Wastewater and Air Samples
Published on: June 30, 2023
Excretion of SARS-CoV-2 through faecal specimens
Yong Zhang1, Cao Chen1, Yang Song1
1NHC key laboratory for Medical Virology, NHC key laboratory for biosafety. National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
The study found SARS-CoV-2 RNA in 36% of fecal samples, with live virus isolated from severe cases. This highlights potential fecal-oral transmission of COVID-19, especially in areas with poor sanitation.
Area of Science:
- Virology
- Public Health
- Infectious Diseases
Background:
- Coronavirus disease 2019 (COVID-19) is a global pandemic caused by SARS-CoV-2.
- Primary transmission routes include respiratory droplets and direct/indirect contact.
- The potential for fecal-oral transmission requires investigation.
Purpose of the Study:
- To investigate the presence and characteristics of SARS-CoV-2 in fecal specimens.
- To assess the potential for fecal-oral transmission of COVID-19.
- To inform disease control strategies.
Main Methods:
- Collection of 258 fecal specimens from nine Chinese provinces.
- Detection of SARS-CoV-2 RNA using real-time RT-PCR.
- Virus isolation in Vero cells and Spike gene sequencing.
Main Results:
- SARS-CoV-2 RNA detected in 36% (93/258) of stool samples.
- Higher positive rates in critical (54.4%) and severe (56.1%) patients.
- Live SARS-CoV-2 isolated from two severe patients; mutations identified in Spike gene.
Conclusions:
- Fecal shedding of SARS-CoV-2 is common, particularly in severe cases.
- Live virus in feces poses a contamination risk, suggesting fecal-oral transmission.
- Findings emphasize the need to consider fecal-oral transmission in COVID-19 control strategies, especially in resource-limited settings.
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