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Updated: Dec 1, 2025

Transmembrane Domain Oligomerization Propensity determined by ToxR Assay
Published on: May 26, 2011
The Diversity and Similarity of Transmembrane Trimerization of TNF Receptors
Linlin Zhao1, Qingshan Fu1, Liqiang Pan1
1Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, United States.
Abstract:
Receptors in the tumor necrosis factor receptor superfamily (TNFRSF) regulate proliferation of immune cells or induce programmed cell death, and many of them are candidates for antibody-based immunotherapy. Previous studies on several death receptors in the TNFRSF including Fas, p75NTR, and DR5 showed that the transmembrane helix (TMH) of these receptors can specifically oligomerize and their oligomeric states have direct consequences on receptor activation, suggesting a much more active role of TMH in receptor signaling than previously appreciated. Here, we report the structure of the TMH of TNFR1, another well studied member of the TNFRSF, in neutral bicelles that mimic a lipid bilayer. We find that TNFR1 TMH forms a defined trimeric complex in bicelles, and no evidences of higher-order clustering of trimers have been detected. Unexpectedly, a conserved proline, which is critical for Fas TMH trimerization, does not appear to play an important role in TNFR1 TMH trimerization, which is instead mediated by a glycine near the middle of the TMH. Further, TNFR1 TMH trimer shows a larger hydrophobic core than that of Fas or DR5, with four layers of hydrophobic interaction along the threefold axis. Comparison of the TNFR1 TMH structure with that of Fas and DR5 reveals reassuring similarities that have functional implications but also significant structural diversity that warrants systematic investigation of TMH oligomerization property for other members of the TNFRSF.
Insights
The transmembrane helix of tumor necrosis factor receptor 1 (TNFR1) forms a trimer, revealing new insights into receptor activation. This finding highlights the diverse roles of transmembrane helices in signaling pathways.
Area of Science:
- Biochemistry
- Molecular Biology
- Structural Biology
Background:
- Tumor necrosis factor receptor superfamily (TNFRSF) receptors regulate immune cell proliferation and programmed cell death.
- Transmembrane helices (TMHs) of TNFRSF members like Fas, p75NTR, and DR5 are known to oligomerize, influencing receptor activation.
- The precise role of TMHs in TNFRSF signaling is an area of ongoing investigation.
Purpose of the Study:
- To determine the oligomeric structure of the TNFR1 transmembrane helix (TMH).
- To understand the molecular interactions mediating TNFR1 TMH oligomerization.
- To compare the structural features of TNFR1 TMH with other TNFRSF members.
Main Methods:
- Structural analysis of TNFR1 TMH in neutral bicelles.
- Biophysical techniques to determine oligomeric state and interactions.
Main Results:
- TNFR1 TMH forms a stable trimeric complex in bicelles.
- Trimerization is mediated by a glycine residue, not a proline as seen in Fas.
- The TNFR1 TMH trimer possesses a larger hydrophobic core with extensive hydrophobic interactions.
Conclusions:
- TNFR1 TMH exhibits a defined trimeric structure crucial for its function.
- Structural diversity exists within TNFRSF TMH oligomerization, impacting receptor signaling.
- Further investigation into other TNFRSF members' TMH structures is warranted.
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