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Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
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Quantification of Protein Interaction Network Dynamics using Multiplexed Co-Immunoprecipitation
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Learned Proximal Networks for Quantitative Susceptibility Mapping.

Kuo-Wei Lai1,2, Manisha Aggarwal3, Peter van Zijl2,3

  • 1Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218, USA.

Medical Image Computing and Computer-Assisted Intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention
|November 9, 2020
PubMed
Summary
This summary is machine-generated.

A new Learned Proximal Convolutional Neural Network (LP-CNN) improves Quantitative Susceptibility Mapping (QSM) by combining data-driven priors with interpretable iterative methods. This flexible deep learning approach offers state-of-the-art results for MR image reconstruction.

Keywords:
Deep learningProximal learningQuantitative Susceptibility Mapping

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Area of Science:

  • Medical Imaging
  • Computational Neuroscience
  • Biophysics

Background:

  • Quantitative Susceptibility Mapping (QSM) reconstructs magnetic susceptibility from MR phase data.
  • Traditional QSM methods face challenges like artifacts and high acquisition costs.
  • Deep learning, particularly CNNs, shows promise for medical image reconstruction but often lacks interpretability.

Purpose of the Study:

  • To develop an interpretable deep learning framework for QSM.
  • To address the ill-posed dipole inversion problem in QSM.
  • To create a flexible QSM method adaptable to varying numbers of phase measurements.

Main Methods:

  • Introduced a Learned Proximal Convolutional Neural Network (LP-CNN) using iterative proximal gradient descent.
  • The LP-CNN learns an implicit regularizer, decoupling the forward operator from data-driven parameters.
  • The framework handles an arbitrary number of phase input measurements without re-training.

Main Results:

  • LP-CNN achieved state-of-the-art reconstruction results compared to traditional and other deep learning QSM methods.
  • The method demonstrated improved artifact reduction and smoothing compared to conventional techniques.
  • The LP-CNN framework offers greater flexibility in QSM reconstruction.

Conclusions:

  • The LP-CNN provides a powerful and flexible deep learning solution for QSM.
  • This approach combines the benefits of data-driven learning and interpretable iterative reconstruction.
  • The LP-CNN advances the field of medical image reconstruction for quantitative susceptibility mapping.