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Updated: Nov 30, 2025

The Soft Agar Colony Formation Assay
Published on: October 27, 2014
ATXN7L3 positively regulates SMAD7 transcription in hepatocellular carcinoma with growth inhibitory function
Ning Sun1, Xinping Zhong2, Shengli Wang1
1Department of Cell Biology, Key laboratory of Cell Biology, Ministry of Public Health, and Key laboratory of Medical Cell Biology, Ministry of Education, School of Life Sciences, China Medical University, Shenyang City, Liaoning Province 110122, China.
Background:
Hepatocellular carcinoma (HCC) is a leading cause of cancer death worldwide, with unmet need for the pharmacological therapy. The functions of ATXN7L3 in HCC progression are not known.
Methods:
RNA sequence, quantitative real-time PCR, and western blot were performed to detect gene expression. Chromatin immunoprecipitation was performed to detect possible mechanisms. Immunohistochemical stain was performed to examine the protein expression. Colony formation, cell growth curve and xenograft tumor experiments were performed to examine cell growth in vitro and in vivo.
Findings:
ATXN7L3 functions as a coactivator for ERα-mediated transactivation in HCC cells, thereby contributing to enhanced SMAD7 transcription. ATXN7L3 is recruited to the promoter regions of SMAD7 gene, thereby regulating histone H2B ubiquitination level, to enhance the transcription of SMAD7. A series of genes regulated by ATXN7L3 were identified. Moreover, ATXN7L3 participates in suppression of tumor growth. In addition, ATXN7L3 is lower expressed in HCC samples, and the lower expression of ATXN7L3 positively correlates with poor clinical outcome in patients with HCC.
Interpretation:
This study demonstrated that ATXN7L3 is a novel regulator of SMAD7 transcription, subsequently participating in inhibition of tumor growth in HCC, which provides an insight to support a previously unknown role of ATXN7L3 in HCC progression. FUND: This work was funded by 973 Program Grant from the Ministry of Science and Technology of China (2013CB945201), National Natural Science Foundation of China (31871286, 81872015, 31701102, 81702800, 81902889), Foundation for Special Professor of Liaoning Province, Natural Science Foundation of Liaoning Province (No.20180530072); China Postdoctoral Science Foundation (2019M651164).
Insights
ATXN7L3 acts as a tumor suppressor in hepatocellular carcinoma (HCC) by regulating SMAD7 transcription and inhibiting tumor growth. Lower ATXN7L3 expression correlates with poor HCC patient outcomes, suggesting its potential as a therapeutic target.
Area of Science:
- Oncology
- Molecular Biology
- Gene Regulation
Background:
- Hepatocellular carcinoma (HCC) presents a significant global health challenge with limited effective pharmacological treatments.
- The specific role of ATXN7L3 in the progression of HCC remains largely unexplored.
Purpose of the Study:
- To elucidate the function of ATXN7L3 in hepatocellular carcinoma (HCC) progression.
- To investigate the molecular mechanisms underlying ATXN7L3's role in HCC.
Main Methods:
- Gene expression analysis using RNA sequencing, qRT-PCR, and Western blot.
- Chromatin immunoprecipitation (ChIP) to determine molecular mechanisms.
- In vitro and in vivo assays including colony formation, cell growth curves, and xenograft tumor experiments.
Main Results:
- ATXN7L3 functions as a coactivator for ERα, enhancing SMAD7 transcription via recruitment to promoter regions and regulating histone H2B ubiquitination.
- ATXN7L3 expression is significantly lower in HCC tissues and correlates with poorer clinical outcomes.
- ATXN7L3 demonstrates tumor-suppressive activity, inhibiting HCC cell growth both in vitro and in vivo.
Conclusions:
- ATXN7L3 is identified as a novel regulator of SMAD7 transcription and a suppressor of tumor growth in HCC.
- This study highlights a previously unrecognized role for ATXN7L3 in HCC pathogenesis, offering potential therapeutic insights.
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