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Diverged and Active Partitiviruses in Lichen.
Syun-Ichi Urayama1,2,3, Nobutaka Doi4, Fumie Kondo5
1Research Center for Bioscience and Nanoscience (CeBN), Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Yokosuka, Japan.
RNA virus diversity in lichens was explored using dsRNA-sequencing. Partitiviruses were found to be dominant, suggesting lichens facilitate virus transfer between fungi and algae.
Area of Science:
- Mycology
- Virology
- Microbiology
Background:
- Lichens are symbiotic microbial consortia primarily composed of fungi and algae or cyanobacteria.
- The viral communities within lichens, particularly RNA viruses, remain largely uncharacterized.
- Understanding lichen-associated viruses is crucial for comprehending lichen biology and microbial interactions.
Purpose of the Study:
- To investigate the diversity and abundance of RNA viruses within a specific lichen microbiome.
- To identify the types of RNA viruses present and their potential hosts within the lichen structure.
- To explore the implications of lichen-associated viruses for microbial horizontal gene transfer.
Main Methods:
- Utilized double-stranded RNA sequencing (dsRNA-seq) technology to capture and analyze viral RNA.
- Bioinformatically analyzed sequencing data to identify and classify RNA virus sequences.
- Focused on a lichen dominated by fungi and algae.
Main Results:
- Identified a significant presence of RNA viruses within the lichen consortium.
- Partitiviruses were found to be the dominant and active viral group detected.
- The identified partitiviruses belonged to two genera, including those known to infect plants and fungi.
Conclusions:
- The lichen microbiome harbors a diverse RNA virus community, with partitiviruses being prominent.
- The lichen environment may serve as a niche facilitating the horizontal transfer of partitiviruses between fungal and algal partners.
- Further research is warranted to fully elucidate the ecological roles and evolutionary dynamics of viruses in lichens.
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