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A Theoretical Approach for Correlating Proteins to Malignant Diseases
Rasha Elnemr1, Mohammed M Nasef2, Passant Elkafrawy2,3
1Climate Change Information Center & Renewable Energy & Expert Systems, Giza, Egypt.
Frontiers in Molecular Biosciences
|November 16, 2020
Summary
This study uses machine learning to uncover links between normal proteins, behaviors, and difficult-to-diagnose malignant tumors. Findings reveal associations that can aid in identifying disease origins and developing diagnostic tools.
Area of Science:
- Biomedical Informatics
- Computational Biology
- Machine Learning in Medicine
Background:
- Malignant tumors develop over years due to complex biological factors, often initiated by habits and behaviors.
- The immune system may fail to recognize malignant tumors as foreign, complicating diagnosis.
- Identifying patterns between behaviors, environmental factors, and diseases is crucial for effective decision-making.
Purpose of the Study:
- To discover associations between normal proteins (environmental factors) and difficult-to-diagnose diseases.
- To propose justifications for the development of these diseases.
- To develop an efficient medical data mining technique for analyzing Erythrocytes Dynamic Antigens Store (EDAS) data.
Main Methods:
- Utilized machine learning techniques, specifically association rule mining.
- Proposed a modified Apriori algorithm for efficient data mining of EDAS data.
- Overcame limitations of existing algorithms like Apriori and Equivalence CLAss Transformation (ECLAT).
Main Results:
- Established a relationship between normal proteins (environmental, food, commensal, tissue) and disease proteins.
- Demonstrated associations between specific habits and behaviors with certain diseases.
- Validated the effectiveness of the modified Apriori algorithm for EDAS data analysis.
Conclusions:
- The study successfully identified significant associations between proteins, behaviors, and malignant diseases.
- The proposed data mining technique offers a more efficient approach for medical data analysis.
- The findings can assist clinical laboratories in uncovering biological causes of malignant diseases.
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