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Updated: Nov 29, 2025

Chemical Inactivation of the E3 Ubiquitin Ligase Cereblon by Pomalidomide-based Homo-PROTACs
Published on: May 15, 2019
Cereblon Modulators Target ZBTB16 and Its Oncogenic Fusion Partners for Degradation via Distinct Structural Degrons
Mary E Matyskiela1, Jinyi Zhu1, Joshua M Baughman1
1Bristol Myers Squibb Company, San Diego, California 92121, United States.
Researchers identified ZBTB16 as a new target for Cereblon (a protein complex) using molecular glues. New compounds CC-3060 and CC-647 degrade ZBTB16, offering a potential therapy for acute promyelocytic leukemia.
Area of Science:
- Biochemistry
- Molecular Biology
- Oncology
Background:
- Targeted protein degradation is a promising therapeutic strategy to expand the range of druggable proteins.
- Molecular glues targeting the Cereblon E3 ligase complex represent a key approach in targeted protein degradation.
Purpose of the Study:
- To identify new substrates for Cereblon E3 ligase.
- To develop novel Cereblon modulators for targeted protein degradation.
- To explore the therapeutic potential of targeting ZBTB16 in acute promyelocytic leukemia.
Main Methods:
- Identification of ZBTB16 as a neosubstrate of Cereblon.
- Development and characterization of Cereblon modulators CC-3060 and CC-647.
- Analysis of ZBTB16 degradation pathways and structural degrons.
- Investigation of ZBTB16-RARα and RARα-ZBTB16 fusion proteins.
Main Results:
- ZBTB16 was identified as a novel Cereblon neosubstrate.
- CC-3060 and CC-647 were found to induce ZBTB16 degradation via distinct structural degrons.
- ZBTB16-RARα and RARα-ZBTB16 fusion proteins, implicated in acute promyelocytic leukemia, were also susceptible to degradation by Cereblon modulators.
- These findings highlight a potential therapeutic strategy for acute promyelocytic leukemia.
Conclusions:
- ZBTB16 is a novel Cereblon neosubstrate targeted by molecular glues CC-3060 and CC-647.
- Targeting ZBTB16 degradation offers a potential therapeutic avenue for acute promyelocytic leukemia driven by ZBTB16/RARA rearrangements.
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