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Classification of Pharynx from MRI Using a Visual Analysis Tool to Study Obstructive Sleep Apnea
Muhammad Laiq Ur Rahman Shahid1, Junaid Mir2, Furqan Shaukat3
1Department of Computer Science and Electrical Engineering, Jacobs University, Bremen, Germany.
Current Medical Imaging
|November 20, 2020
Summary
A new classifier accurately identifies the pharynx in MRI scans, aiding obstructive sleep apnea (OSA) research. This automated method improves efficiency and provides insights into OSA pathogenesis.
Area of Science:
- Medical Imaging
- Computer Vision
- Sleep Medicine
Background:
- Obstructive sleep apnea (OSA) is a prevalent chronic sleep disorder.
- Understanding pharyngeal anatomy is key to OSA pathogenesis.
- Pharyngeal classification is essential for OSA analysis.
Purpose of the Study:
- To develop an automated classifier for pharyngeal segmentation from MRI data.
- To improve the efficiency and accuracy of pharyngeal analysis in OSA research.
Main Methods:
- A visual analysis-based classification pipeline was developed.
- Stages include pre-processing, feature extraction (categorical and numerical), and supervised classification.
- The classifier was trained using visual analytics and silhouette coefficient.
Main Results:
- The automated classifier achieved an 86% Jaccard coefficient for pharyngeal classification on MRI datasets.
- Expert knowledge can optimize feature selection and weighting during classifier training.
Conclusions:
- The proposed classifier is accurate and computationally efficient.
- It offers insights into individual and collective feature influences.
- Applications include large-scale epidemiological studies for OSA analysis.
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