Related Experiment Video
Updated: Nov 29, 2025

Isolation and Functional Assessment of Human Breast Cancer Stem Cells from Cell and Tissue Samples
Published on: October 2, 2020
WDHD1 is essential for the survival of PTEN-inactive triple-negative breast cancer
Ayse Ertay1, Huiquan Liu2, Dian Liu2
1Biological Sciences, Faculty of Environmental and Life Sciences, University of Southampton, Southampton, SO17 1BJ, UK.
Abstract:
Triple-negative breast cancer (TNBC) is the most aggressive type of breast cancer that lacks the oestrogen receptor, progesterone receptor and human epidermal growth factor receptor 2, making it difficult to target therapeutically. Targeting synthetic lethality is an alternative approach for cancer treatment. TNBC shows frequent loss of phosphatase and tensin homologue (PTEN) expression, which is associated with poor prognosis and treatment response. To identify PTEN synthetic lethal interactions, TCGA analysis coupled with a whole-genome siRNA screen in isogenic PTEN-negative and -positive cells were performed. Among the candidate genes essential for the survival of PTEN-inactive TNBC cells, WDHD1 (WD repeat and high-mobility group box DNA-binding protein 1) expression was increased in the low vs. high PTEN TNBC samples. It was also the top hit in the siRNA screen and its knockdown significantly inhibited cell viability in PTEN-negative cells, which was further validated in 2D and 3D cultures. Mechanistically, WDHD1 is important to mediate a high demand of protein translation in PTEN-inactive TNBC. Finally, the importance of WDHD1 in TNBC was confirmed in patient samples obtained from the TCGA and tissue microarrays with clinic-pathological information. Taken together, as an essential gene for the survival of PTEN-inactive TNBC cells, WDHD1 could be a potential biomarker or a therapeutic target for TNBC.
Insights
Triple-negative breast cancer (TNBC) is aggressive and hard to treat. Researchers found that WDHD1 is essential for PTEN-inactive TNBC survival, suggesting it as a potential therapeutic target.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Triple-negative breast cancer (TNBC) is an aggressive subtype lacking standard therapeutic targets.
- Loss of phosphatase and tensin homologue (PTEN) expression is common in TNBC, correlating with poor prognosis.
- Synthetic lethality offers a promising strategy for targeting cancers with specific genetic alterations.
Purpose of the Study:
- To identify synthetic lethal interactions in PTEN-deficient TNBC.
- To investigate the role of WDHD1 (WD repeat and high-mobility group box DNA-binding protein 1) in TNBC.
- To evaluate WDHD1 as a potential therapeutic target or biomarker for TNBC.
Main Methods:
- TCGA database analysis to assess gene expression in TNBC.
- Whole-genome siRNA screening in PTEN-negative and -positive cells.
- Validation of WDHD1 function in 2D and 3D cell cultures and patient samples.
Main Results:
- WDHD1 expression is upregulated in PTEN-low TNBC samples.
- WDHD1 knockdown significantly reduces viability in PTEN-negative TNBC cells.
- WDHD1 plays a crucial role in mediating protein translation demands in PTEN-inactive TNBC.
Conclusions:
- WDHD1 is essential for the survival of PTEN-inactive TNBC cells.
- WDHD1 represents a potential synthetic lethal target for TNBC treatment.
- WDHD1 may serve as a valuable biomarker for TNBC prognosis and therapeutic response.
Related Concept Videos
Abnormal Proliferation
Hedgehog Signaling Pathway
Canonical Wnt Signaling Pathway
mTOR Signaling and Cancer Progression
The mTOR pathway or the...
PI3K/mTOR/AKT Signaling Pathway
Loss of Tumor Suppressor Gene Functions
When the tumor suppressor genes develop mutations or are lost, cells start growing out of control, leading to cancer. However, a single functional copy of the tumor suppressor gene is enough for the cells to maintain their normal functions and cell...

