Antimicrobial Resistance Risk Assessment Models and Database System for Animal-Derived Pathogens
Xinxing Li1, Buwen Liang1, Ding Xu2
1Beijing Advanced Innovation Center for Food Nutrition and Human Health, College of Information and Electrical Engineering, China Agricultural University, Beijing 100083, China.
Antimicrobial resistance (AMR) is a serious threat. This study developed new models and a database system to assess drug resistance risk in China, using E. coli in piglets as an example.
Area of Science:
- Veterinary Medicine
- Microbiology
- Public Health
Background:
- Antibiotic overuse fuels antimicrobial resistance (AMR), endangering animal and human health.
- China faces challenges in AMR surveillance and risk assessment compared to global standards.
- This study addresses the need for advanced monitoring and risk evaluation of AMR in China.
Purpose of the Study:
- To develop advanced methods for monitoring antibiotic use and AMR data in China.
- To evaluate AMR risk using piglets and E. coli as a model.
- To highlight the severity of AMR and promote responsible antibiotic use.
Main Methods:
- Principal component analysis (PCA) for an anti-E. coli drug resistance index model.
- Second-order Monte Carlo simulation for a piglet E. coli disease risk assessment model.
- Development of a browser/server architecture-based visualization database system for pathogens.
Main Results:
- Hohhot identified as the highest AMR risk area for E. coli in China.
- The disease risk assessment model predicted a 7.174% probability of E. coli disease, with a 3.074% absolute error from the true 4.1% risk.
- The developed system and models offer a novel approach to AMR risk assessment.
Conclusions:
- An innovative method for rapid and accurate drug resistance risk assessment was established, using E. coli as a case study.
- The developed system and models are valuable for AMR monitoring and evaluation.
- Findings underscore the importance of prudent antibiotic use for food safety and public health.
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