Related Experiment Video
Updated: Nov 28, 2025

RNA Pull-down Procedure to Identify RNA Targets of a Long Non-coding RNA
Published on: April 10, 2018
Long Noncoding RNA PMS2L2 Downregulates miR-24 through Methylation to Suppress Cell Apoptosis in Ulcerative Colitis
Ting Yu1, Fanyu Meng1, Minning Xie1
1Department of TCM Proctlogy, Jinshan Hospital Affiliated to Fudan University, Shanghai, China.
Background:
Ulcerative colitis (UC) is an inflammatory bowel disease characterized by chronic inflammation of the colon. It has been reported that PMS2L2 plays protective roles in inflammatory injury. This study aimed to investigate the role of the long noncoding RNA PMS2L2 in UC.
Methods:
Sixty-two patients with UC as well as 62 age- and gender-matched healthy controls were enrolled. Expressions of PMS2L2 and miR-24 in plasma from UC patients and healthy controls were determined by RT-qPCR. The interaction between PMS2L2 and miR-24 was predicted by bioinformatics and confirmed by RNA immunoprecipitation and RNA pull-down. The role of PMS2L2 in the regulation of miR-24 gene methylation was analyzed by methylation-specific PCR. The effects of PMS2L2 and miR-24 on the expressions of apoptosis-related proteins were detected by Western blots.
Results:
PMS2L2 was downregulated in the plasma of UC patients compared to that in age- and gender-matched healthy control. In human colonic epithelial cells (HCnEpCs), PMS2L2 overexpression inhibited miR-24 expression via promoting the methylation of miR-24 gene. In contrast, miR-24 overexpression failed to affect PMS2L2. In the detection of cell apoptosis, PMS2L2 overexpression could promote the expression of Bcl-2 and inhibit Bax, cleaved-caspase-3, and cleaved-caspase-9 expressions stimulated by LPS. Flow cytometer revealed that PMS2L2 elevation suppressed the apoptosis of HCnEpCs induced by LPS, but miR-24 aggravated the apoptosis. PMS2L2 overexpression rescued the detrimental effect of miR-24 on cell apoptosis.
Conclusion:
PMS2L2 may downregulate miR-24 via methylation to suppress cell apoptosis in UC.
Insights
The long noncoding RNA PMS2L2 is downregulated in ulcerative colitis (UC). PMS2L2 suppresses UC cell apoptosis by inhibiting miR-24 expression through methylation.
Area of Science:
- Gastroenterology
- Molecular Biology
- Inflammation Research
Background:
- Ulcerative colitis (UC) is a chronic inflammatory bowel disease affecting the colon.
- The long noncoding RNA (lncRNA) PMS2L2 has demonstrated protective effects against inflammatory injury.
Purpose of the Study:
- To investigate the role of lncRNA PMS2L2 in the pathogenesis of ulcerative colitis.
- To elucidate the molecular mechanism by which PMS2L2 influences UC development.
Main Methods:
- Quantitative real-time PCR (RT-qPCR) to measure PMS2L2 and miR-24 expression in UC patients and controls.
- Bioinformatics, RNA immunoprecipitation, and RNA pull-down assays to confirm PMS2L2-miR-24 interaction.
- Methylation-specific PCR and Western blotting to assess gene methylation and apoptosis-related protein expression.
Main Results:
- PMS2L2 expression was significantly downregulated in the plasma of UC patients compared to healthy controls.
- Overexpression of PMS2L2 inhibited miR-24 expression in human colonic epithelial cells by promoting miR-24 gene methylation.
- PMS2L2 overexpression suppressed lipopolysaccharide (LPS)-induced apoptosis by upregulating Bcl-2 and downregulating Bax, cleaved-caspase-3, and cleaved-caspase-9.
Conclusions:
- PMS2L2 plays a protective role in ulcerative colitis by downregulating miR-24 expression via methylation.
- This mechanism suppresses cell apoptosis, suggesting PMS2L2 as a potential therapeutic target for UC.
Related Concept Videos
MicroRNAs
MicroRNAs
Abnormal Proliferation
lncRNA - Long Non-coding RNAs
Experimental RNAi
Nonsense-mediated mRNA Decay
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...