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C9orf72 Hexanucleotide Repeat in Huntington-Like Patients: Systematic Review and Meta-Analysis
Carlos Alva-Diaz1, Christoper A Alarcon-Ruiz2, Kevin Pacheco-Barrios2
1Facultad de Ciencias de la Salud, Universidad Científica del Sur, Lima, Peru.
Insights
The C9orf72 gene hexanucleotide repeat expansion is rarely found in Huntington-Like disorders (HLD), occurring in only 1% of patients. Further research is needed to confirm this low frequency across diverse populations.
Area of Science:
- Genetics
- Neurology
Background:
- Huntington-Like Disorders (HLD) present a Huntington phenotype due to various genetic causes.
- The C9orf72 gene hexanucleotide repeat expansion is a potential, yet unconfirmed, contributor to HLD etiology.
Approach:
- A systematic review and meta-analysis was conducted to determine the frequency of the C9orf72 hexanucleotide repeat expansion in HLD patients.
- Searches were performed across major databases (Medline, Scopus, Web of Science, Embase) with protocol registration (PROSPERO).
- Studies were selected based on HLD patients carrying the C9orf72 expansion (≥30 repeats), with intermediate alleles (20-29 repeats) also analyzed.
Key Points:
- Out of 219 studies reviewed, 9 were selected, encompassing 1,123 HLD individuals.
- The C9orf72 expansion was identified in 1% of HLD patients (18 individuals), with a pooled frequency of 1% (95% CI: 0-2%).
- Five individuals (3%) carried intermediate alleles (20-29 repeats), showing higher heterogeneity (I² = 78.5%).
Conclusions:
- The frequency of the C9orf72 unstable hexanucleotide repeat expansion in Huntington-Like Disorder patients is notably low.
- Additional research with detailed clinical data and broader ethnic representation is necessary to validate these findings.
Abstract:
Introduction: Patients with Huntington-Like disorders (HLD) comprise a variety of allelic disorders sharing a Huntington phenotype. The hexanucleotide repeat expansion of the C9orf72 gene could explain part of the HLD etiology. We aimed to conduct a systematic review and meta-analysis looking for the frequency of the hexanucleotide repeat expansion of the C9orf72 gene in HLD patients. Methods: The protocol was registered on the International Prospective Register of Systematic Reviews database (PROSPERO) (registration number: CRD42018105465). The search was carried out in Medline, Scopus, Web of Science, and Embase in April 2018, and updated in July 2020. Observational studies reporting patients with HLD carrying the hexanucleotide repeat expansion in the C9orf72 gene were selected and reviewed; this process was duplicated. The cutoff threshold for considering the hexanucleotide expansion as a pathogenic variant was equal to or >30 G4C2 repeats. Cases with intermediate alleles with 20-29 repeat are also analyzed. Pooled frequency and 95% CI were calculated using random-effects models. Results: Nine out of 219 studies were selected, reporting 1,123 affected individuals with HLD. Among them, 18 individuals carried C9orf72 expansion, representing 1% (95% CI: 0-2%, I 2 = 0%) of the pooled frequency. Seven selected studies came from European centers, one was reported at a US center, and one came from a South-African center. We identified five individuals carrying intermediate alleles representing 3% (95% CI: 0-14%, I 2 = 78.5%). Conclusions: The frequency of C9orf72 unstable hexanucleotide repeat expansion in HLD patients is very low. Further studies with more accurate clinical data and from different ethnic backgrounds are needed to confirm this observation.
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