PCNA Monoubiquitination Is Regulated by Diffusion of Rad6/Rad18 Complexes along RPA Filaments

Mingjie Li1, Bhaswati Sengupta1, Stephen J Benkovic1

  • 1Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, United States.

Biochemistry
|November 27, 2020
PubMed

Insights

Replication protein A (RPA) recruits the Rad6/Rad18 complex to DNA damage sites, promoting essential PCNA monoubiquitination for translesion DNA synthesis and cell survival.

Area of Science:

  • Molecular Biology
  • DNA Repair
  • Biochemistry

Background:

  • Translesion DNA synthesis (TLS) is crucial for replicating damaged DNA.
  • PCNA monoubiquitination by Rad6/Rad18 is essential for TLS.
  • Replication protein A (RPA) interacts with TLS machinery but its role is unclear.

Purpose of the Study:

  • To elucidate the role of RPA in regulating PCNA monoubiquitination.
  • To investigate the dynamics of the Rad6/Rad18 complex on RPA filaments.

Main Methods:

  • Kinetic assays to monitor PCNA monoubiquitination.
  • Single-molecule Förster Resonance Energy Transfer (smFRET) microscopy to observe Rad6/Rad18 dynamics on RPA filaments.

Main Results:

  • Rad6/Rad18 is recruited to RPA filaments via Rad18-RPA interactions.
  • The Rad6/Rad18 complex translocates along RPA filaments.
  • RPA-mediated translocation enhances PCNA monoubiquitination efficiency.

Conclusions:

  • RPA plays a critical role in the specificity and efficiency of PCNA monoubiquitination.
  • This study demonstrates ATP-independent translocation of a protein complex along a protein filament.

Related Concept Videos

Restarting Stalled Replication Forks02:37

Restarting Stalled Replication Forks

DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart,...
6.1K
DNA Damage can Stall the Cell Cycle02:37

DNA Damage can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
9.7K
Homologous Recombination02:31

Homologous Recombination

The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
60.0K
Long-patch Base Excision Repair01:02

Long-patch Base Excision Repair

Since the discovery of the two BER pathways, there has been a debate about how a cell chooses one pathway over the other and the factors determining this selection. Numerous in vitro experiments have pointed out multiple determinants for the sub-pathway selection. These are:
7.6K
Mechanism of Filopodia Formation01:39

Mechanism of Filopodia Formation

Filopodia are thin, actin-rich cellular protrusions that play an important role in many fundamental cellular functions. They vary in their occurrence, length, and positioning in different cell types, suggesting their diverse roles.
Their main function is to guide migrating cells during normal tissue morphogenesis or cancer metastasis by recognizing and making initial contacts with the extracellular matrix. However, they can also act as stationary cell anchors or help to establish communication...
2.8K
piRNA - Piwi-interacting RNAs02:57

piRNA - Piwi-interacting RNAs

PIWI-interacting RNAs, or piRNAs, are the most abundant short non-coding RNAs. More than 20,000 genes have been found in humans that code for piRNAs while only 2000 genes have been found for miRNAs. piRNAs can act at the transcriptional and post-transcriptional levels and have a vital role in silencing transposable elements present in germ cells. They are also involved in epigenetic silencing and activation. Previously, they were thought to function only in germ cells but new evidence suggests...
7.3K