The epigenetic basis of cellular heterogeneity
1Laboratory of Epigenome Biology, Systems Biology Center, NHLBI, NIH, Bethesda, MD, USA. benjamin.carter@nih.gov.
Nature Reviews. Genetics
|November 27, 2020
Summary
Single-cell sequencing reveals gene expression differences in similar cells. Epigenomic profiling shows how chromatin organization drives this cellular heterogeneity, impacting tissue biology and diseases like cancer.
Area of Science:
- Genomics
- Molecular Biology
- Epigenetics
Background:
- Single-cell sequencing highlights significant gene expression variability among seemingly identical cells.
- This cellular heterogeneity is crucial for understanding tissue biology and diseases, including cancer.
- Epigenomic features like chromatin accessibility and histone modifications influence gene expression.
Purpose of the Study:
- To explore how epigenomic information contributes to gene expression heterogeneity at a single-cell level.
- To investigate the role of chromatin organization in defining cell-to-cell expression differences.
Main Methods:
- Utilizing single-cell sequencing to profile gene transcript levels.
- Applying advanced single-cell epigenomic profiling techniques.
- Mapping chromatin accessibility, nucleosome positioning, and histone modifications.
Main Results:
- Single-cell epigenomic profiling enables high-resolution mapping of chromatin states.
- Variations in chromatin organization collectively determine gene expression heterogeneity.
- Epigenomic characteristics are linked to the expression or repression of specific genes.
Conclusions:
- Chromatin organization plays a key role in generating gene expression heterogeneity in single cells.
- Understanding single-cell epigenomics is vital for deciphering cellular function and disease mechanisms.
- Advances in single-cell epigenomic methods provide new insights into cellular diversity.
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