Comprehensive analysis of cutaneous and uveal melanoma liver metastases

Esmee P Hoefsmit1, Elisa A Rozeman2, Trieu My Van1

  • 1Molecular Oncology & Immunology, Netherlands Cancer Institute, Amsterdam, The Netherlands.

Abstract

Insights

Cutaneous melanoma (CM) and uveal melanoma (UM) show different responses to immune checkpoint blockade (ICB). UM has higher T cell exhaustion, while CM relies more on PD-L1, explaining varied ICB efficacy.

Area of Science:

  • Oncology
  • Immunology
  • Genomics

Background:

  • Cutaneous melanoma (CM) and uveal melanoma (UM) exhibit profound disparities in response to immune checkpoint blockade (ICB).
  • The underlying mechanisms for this differential response remain poorly understood.
  • Comparative analysis of metastases from the same site (liver) is crucial for dissecting these mechanisms.

Purpose of the Study:

  • To characterize and compare liver metastases from CM and UM patients.
  • To elucidate the molecular and immunological factors contributing to differential ICB response.
  • To identify potential therapeutic strategies for improving UM treatment.

Main Methods:

  • Genomic analysis (whole exome sequencing) of tumor samples.
  • Transcriptional analysis (RNA sequencing) of tumor samples.
  • Protein expression analysis (immunohistochemistry, GeoMx Digital Spatial Profiling).

Main Results:

  • CM and UM metastases differ in somatic mutation profiles, tumor mutational burden (TMB), and predicted neoantigens.
  • UM metastases show higher melanin content and MelanA expression; CM metastases exhibit higher PD-L1 expression.
  • Immune infiltration is similar, but UM metastases have a higher ratio of exhausted CD8 T cells.

Conclusions:

  • Differential TMB and immune cell exhaustion contribute to varied ICB responses in CM and UM.
  • CM's greater dependency on PD-L1 and UM's higher T cell exhaustion explain response differences.
  • Reversing T cell exhaustion beyond PD-1 blockade is a potential strategy to improve metastatic UM treatment.

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