Related Experiment Video
Updated: Nov 27, 2025

A Data Integration Workflow to Identify Drug Combinations Targeting Synthetic Lethal Interactions
Published on: May 27, 2021
Cohesin mutations are synthetic lethal with stimulation of WNT signaling
Chue Vin Chin1,2,3, Jisha Antony1,2,3, Sarada Ketharnathan1,3
1Department of Pathology, Otago Medical School, University of Otago, Dunedin, New Zealand.
Abstract:
Mutations in genes encoding subunits of the cohesin complex are common in several cancers, but may also expose druggable vulnerabilities. We generated isogenic MCF10A cell lines with deletion mutations of genes encoding cohesin subunits SMC3, RAD21, and STAG2 and screened for synthetic lethality with 3009 FDA-approved compounds. The screen identified several compounds that interfere with transcription, DNA damage repair and the cell cycle. Unexpectedly, one of the top 'hits' was a GSK3 inhibitor, an agonist of Wnt signaling. We show that sensitivity to GSK3 inhibition is likely due to stabilization of β-catenin in cohesin-mutant cells, and that Wnt-responsive gene expression is highly sensitized in STAG2-mutant CMK leukemia cells. Moreover, Wnt activity is enhanced in zebrafish mutant for cohesin subunits stag2b and rad21. Our results suggest that cohesin mutations could progress oncogenesis by enhancing Wnt signaling, and that targeting the Wnt pathway may represent a novel therapeutic strategy for cohesin-mutant cancers.
Insights
Cohesin mutations in cancer may create vulnerabilities. Targeting Wnt signaling with GSK3 inhibitors shows promise for treating cohesin-mutant cancers by stabilizing beta-catenin.
Area of Science:
- Cancer Biology
- Molecular Oncology
- Genetics
Background:
- Mutations in cohesin complex genes are prevalent in various cancers.
- These mutations can present unique therapeutic vulnerabilities.
- The cohesin complex plays a crucial role in genome stability and gene regulation.
Purpose of the Study:
- To identify synthetic lethal interactions with cohesin subunit mutations.
- To explore the therapeutic potential of targeting vulnerabilities in cohesin-mutant cancers.
- To investigate the role of Wnt signaling in cohesin-mutant oncogenesis.
Main Methods:
- Generated isogenic cell lines with cohesin subunit deletions (SMC3, RAD21, STAG2).
- Screened 3009 FDA-approved compounds for synthetic lethality.
- Utilized beta-catenin stabilization assays and Wnt-responsive gene expression analysis.
- Employed zebrafish models with mutations in cohesin subunits (stag2b, rad21).
Main Results:
- Identified compounds affecting transcription, DNA repair, and cell cycle.
- Discovered GSK3 inhibitors as potent sensitizers in cohesin-mutant cells.
- Demonstrated beta-catenin stabilization as the mechanism for GSK3 inhibitor sensitivity.
- Observed enhanced Wnt signaling in STAG2-mutant leukemia cells and zebrafish models.
Conclusions:
- Cohesin mutations may promote cancer by enhancing Wnt signaling.
- Targeting the Wnt pathway represents a potential therapeutic strategy for cohesin-mutant cancers.
- GSK3 inhibition offers a novel approach for treating these malignancies.
Related Concept Videos
Cohesins
Cohesin complexes in Meiotic Division
Meiosis involves two distinct rounds of chromosomal segregation and cell divisions— Meiosis I followed by Meiosis II – producing four daughter cells. Meiosis I includes the separation of...
Separation of Sister Chromatids
At the onset of anaphase, separase, a proteolytic enzyme, is...
Canonical Wnt Signaling Pathway
Anaphase Promoting Complex
Non-Canonical Wnt Signaling Pathways
Meiosis II
The timing and cell division patterns of meiosis differ between males and females. In male meiosis, the centrosomes are part of the formation of the meiotic spindle. However, in oocytes, including that of humans, Drosophila,...

