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Published on: July 17, 2020
Phosphorylation and Driver Mutations in PI3Kα and PTEN Autoinhibition
Ruth Nussinov1,2, Mingzhen Zhang3, Chung-Jung Tsai3
1Computational Structural Biology Section, Frederick National Laboratory for Cancer Research in the Laboratory of Cancer Immunometabolism, NCI, Frederick, Maryland. NussinoR@mail.nih.gov.
Abstract:
PI3K and PTEN are the second and third most highly mutated proteins in cancer following only p53. Their actions oppose each other. PI3K phosphorylates signaling lipid PIP2 to PIP3 PTEN dephosphorylates it back. Driver mutations in both proteins accrue PIP3 PIP3 recruits AKT and PDK1 to the membrane, promoting cell-cycle progression. Here we review phosphorylation events and mutations in autoinhibition in PI3K and PTEN from the structural standpoint. Our purpose is to clarify how they control the autoinhibited states. In autoinhibition, a segment or a subunit of the protein occludes its functional site. Protein-protein interfaces are often only marginally stable, making them sensitive to changes in conditions in living cells. Phosphorylation can stabilize or destabilize the interfaces. Driver mutations commonly destabilize them. In analogy to "passenger mutations," we coin "passenger phosphorylation" to emphasize that the presence of a phosphorylation recognition sequence logo does not necessarily imply function. Rather, it may simply reflect a statistical occurrence. In both PI3K and PTEN, autoinhibiting phosphorylation events are observed in the occluding "piece." In PI3Kα, the "piece" is the p85α subunit. In PTEN, it is the C-terminal segment. In both enzymes the stabilized interface covers the domain that attaches to the membrane. Driver mutations that trigger rotation of the occluding piece or its deletion prompt activation. To date, both enzymes lack specific, potent drugs. We discuss the implications of detailed structural and mechanistic insight into oncogenic activation and how it can advance allosteric precision oncology.
Insights
Phosphatidylinositol 3-kinases (PI3K) and PTEN proteins are frequently mutated in cancer. Structural insights reveal how mutations and phosphorylation control their autoinhibited states, impacting cell growth and offering new therapeutic targets.
Area of Science:
- Biochemistry
- Molecular Biology
- Cancer Research
Background:
- PI3K and PTEN are critical regulators of cell signaling, opposing each other's actions on the PIP2/PIP3 lipid.
- Mutations in PI3K and PTEN are highly prevalent in cancer, leading to uncontrolled cell-cycle progression.
- Autoinhibition is a key regulatory mechanism for PI3K and PTEN, involving structural occlusion of their active sites.
Purpose of the Study:
- To review structural aspects of autoinhibition in PI3K and PTEN.
- To clarify how phosphorylation and mutations influence these autoinhibited states.
- To explore the implications for allosteric precision oncology.
Main Methods:
- Structural analysis of PI3K and PTEN.
- Review of phosphorylation events and mutations affecting autoinhibition.
- Mechanistic interpretation of protein-protein interfaces and their stability.
Main Results:
- Autoinhibition in PI3K and PTEN involves occlusion of the functional site by specific protein segments or subunits.
- Phosphorylation can stabilize or destabilize these autoinhibiting interfaces.
- Driver mutations commonly destabilize interfaces, leading to protein activation and promoting cancer.
- The concept of 'passenger phosphorylation' is introduced to distinguish functional from statistical phosphorylation events.
Conclusions:
- Structural understanding of PI3K and PTEN autoinhibition is crucial for comprehending oncogenic activation.
- Destabilization of autoinhibitory interfaces by mutations is a key driver of cancer.
- Targeting these mechanisms offers potential for developing novel allosteric cancer therapies.
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