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Convolutional neural network for automated mass segmentation in mammography.

Dina Abdelhafiz1,2, Jinbo Bi1, Reda Ammar1

  • 1Department of Computer Science and Engineering, University of Connecticut, Storrs, 06269, CT, USA.

BMC Bioinformatics
|December 10, 2020
PubMed
Summary

A new Vanilla U-Net model precisely segments mass lesions in mammograms, outperforming other deep learning models. This advancement aids radiologists in differentiating benign and malignant tumors for improved diagnostic accuracy.

Keywords:
Breast cancerComputer-aided detection (CAD)Convolutional neural networks (CNNs)Deep learning (DL)DetectionGround truth maps (GTMs)LocalizationMachine learning (ML)Mammograms (MGs)Pre-processingRegion growingSegNetSemantic pixel-wise segmentationU-NetVanilla U-Net

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Area of Science:

  • Medical Imaging
  • Artificial Intelligence
  • Computer Vision

Background:

  • Mammogram (MG) image analysis for lesion segmentation is challenging.
  • Deep learning (DL) methods offer advanced solutions but require precise models.
  • Developing accurate models for mass lesion segmentation in MG images is crucial for early cancer detection.

Purpose of the Study:

  • To develop a novel deep learning model for precise segmentation of mass lesions in mammogram images.
  • To improve the accuracy and efficiency of automated lesion detection in mammography.
  • To enhance radiologists' ability to differentiate between benign and malignant lesions.

Main Methods:

  • A modified U-Net architecture, termed Vanilla U-Net, was developed for semantic segmentation.
  • The model combines low-level and high-level features to extract contextual information.
  • Training was performed on multiple large-scale public (CBIS-DDSM, BCDR-01, INbreast) and private mammogram databases.
  • Data augmentation techniques were employed to enhance model robustness and performance.

Main Results:

  • The Vanilla U-Net model demonstrated superior performance compared to state-of-the-art models like Faster R-CNN, FCN, SegNet, Dilated-Net, and original U-Net.
  • Achieved a mean test accuracy of 92.6% on digitized film-based and fully digitized MG images.
  • Obtained a mean Dice coefficient index (DI) of 0.951 and a mean Intersection over Union (IOU) of 0.909.
  • Data augmentation significantly improved mean DI from 0.922 to 0.951 and mean IOU from 0.856 to 0.909.

Conclusions:

  • The proposed Vanilla U-Net model enables precise pixel-wise segmentation of masses in mammograms.
  • The model's ability to capture multi-scale spatial context aids in differentiating lesion types.
  • Transfer learning, data augmentation, and architectural modifications led to superior performance over conventional and other DL models.