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Optimizing digitalization effort in morphometrics.

Allowen Evin1, Vincent Bonhomme1, Julien Claude1

  • 1Institut des Sciences de l'Evolution-Montpellier, UMR 5554-ISEM, CNRS, Université de Montpellier, IRD, EPHE, 2 place Eugène Bataillon, CC065, 34095 Montpellier Cedex 5, France.

Biology Methods & Protocols
|December 16, 2020
PubMed
Summary
This summary is machine-generated.

This study introduces a workflow to assess and minimize errors in morphometric data acquisition. It helps determine if datasets can be pooled, optimizing digitization efforts for morphological variation studies.

Keywords:
data sharinggeometric morphometricsinteroperabilitymeasurement error

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Area of Science:

  • Morphometrics
  • Biological Data Analysis
  • Quantitative Morphology

Background:

  • Phenotypic quantification is crucial for studying morphological variation.
  • Data acquisition time varies significantly based on methods and information needs.
  • Optimizing digitization involves pooling data, automation, or reducing measurements, but pooling carries risks of operator error.

Purpose of the Study:

  • To present an analytical workflow for estimating within- and among-operator biases.
  • To assess the feasibility of pooling morphometric datasets.
  • To optimize digitization efforts and manage errors in morphological studies.

Main Methods:

  • Developed an analytical workflow to quantify operator biases.
  • Applied the workflow to a worked example using Sus scrofa teeth with 18 morphometric approaches.
  • Identified and quantified potential error sources in the data acquisition workflow.

Main Results:

  • Pooling and sharing morphometric data necessitates careful error examination.
  • The chosen morphometric approach significantly influences the amount of error.
  • It is possible to estimate study analytical power using small data subsets to select optimal protocols and reduce variables, especially concerning semi-landmarks.

Conclusions:

  • Pooling morphometric data should be avoided in certain cases due to potential errors.
  • The workflow aids in optimizing digitization efforts and provides best practices for error management.
  • Selecting appropriate morphometric protocols and managing semi-landmark data inflation is key for robust analysis.