Related Experiment Video
Updated: Nov 25, 2025

FtsZ Polymerization Assays: Simple Protocols and Considerations
Published on: November 16, 2013
Evidence of conformational switch in Streptococcus pneumoniae FtsZ during polymerization
Rachana Rao Battaje1, Prajakta Bhondwe1, Hemendra Pal Singh Dhaked1
1Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.
Abstract:
FtsZ, the master coordinator of bacterial cell division, assembles into filaments in the presence of nucleotide. FtsZ from Streptococcus pneumoniae bears two tryptophan residues (W294 and W378) in its amino acid sequence. The tryptophan fluorescence of FtsZ increases during the assembly of FtsZ. We hypothesized that this increase in the fluorescence intensity was due to the change in the environment of one or both tryptophan residues. To examine this, we constructed two mutants (W294F and W378F) of FtsZ by individually replacing tryptophan with phenylalanine. The mutants displayed similar secondary structures, GTPase activity, and polymerization ability as the wild type FtsZ. During the polymerization, only one tryptophan (W294) showed an increase in its fluorescence intensity. Using time-correlated single-photon counting, the fluorescence lifetime of W294 was found to be significantly higher than W378, indicating that W294 was more buried in the structure than W378. The lifetime of W294 further increased during polymer formation, while that of W378 remained unchanged. Fluorescence quenching experiment suggested that the solvent exposure of W294 reduced during the polymerization of FtsZ. W294 is located near the T-7 loop of the protein, a region important for the monomer-monomer interaction during the formation of a protofilament. The results indicated that the region around W294 of S. pneumoniae FtsZ undergoes a conformational switch during polymerization as seen for FtsZ from other bacteria.
Insights
Bacterial cell division protein FtsZ
Area of Science:
- Microbiology
- Molecular Biology
- Biochemistry
Background:
- FtsZ protein coordinates bacterial cell division by assembling into filaments.
- Streptococcus pneumoniae FtsZ has two tryptophan residues, W294 and W378.
- Tryptophan fluorescence of FtsZ increases during filament assembly.
Purpose of the Study:
- To investigate the cause of increased FtsZ tryptophan fluorescence during polymerization.
- To determine which tryptophan residue's environment changes upon FtsZ assembly.
Main Methods:
- Constructed W294F and W378F FtsZ mutants.
- Analyzed secondary structure, GTPase activity, and polymerization.
- Measured tryptophan fluorescence intensity, lifetime, and quenching.
- Utilized time-correlated single-photon counting.
Main Results:
- Mutants showed similar structural and functional properties to wild-type FtsZ.
- Only W294 fluorescence intensity increased during polymerization.
- W294 exhibited a higher fluorescence lifetime than W378, indicating deeper burial.
- W294 lifetime increased further upon polymer formation, suggesting reduced solvent exposure.
- W378 fluorescence remained unchanged during polymerization.
Conclusions:
- The increased fluorescence of FtsZ during polymerization is primarily due to changes around W294.
- W294 undergoes a conformational change, becoming less solvent-exposed during filament assembly.
- This conformational switch near the T-7 loop is crucial for FtsZ polymerization and bacterial cell division.
Related Concept Videos
Cytoskeletal Proteins in Bacteria
Actin Polymerization
The nucleation phase involves forming a stable nucleus consisting of three actin monomers to form a new actin filament. Actin-binding proteins such as formins and Arp2/3 complex help filament growth post-nucleation. The Formins form straight...
Fimbriae, Pili, and Axial Filaments
Generation of Straight or Branched Actin Filaments
Arp2/3 Complex
Arp2/3 complex is a seven-subunit complex consisting of two proteins similar to actin- Arp2 and Arp3, and five other subunits that help keep Arp2 and Arp3 inactive. When required, the complex is...
Bacterial Protein Maturation
Actin Polymerization and Cell Motility
Actin cytoskeleton dynamics can produce pushing, pulling, and resistance forces that help the cell to migrate....

