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Detection of maternal X chromosome abnormalities using single nucleotide polymorphism-based noninvasive prenatal
Kimberly A Martin1, Carole A Samango-Sprouse2, Valerie Kantor1
1Natera, Inc, San Carlos, CA.
American Journal of Obstetrics & Gynecology MFM
|December 21, 2020
Summary
Noninvasive prenatal testing can accurately identify maternal X chromosome abnormalities, such as Turner syndrome (45,X) and 47,XXX. This early detection helps manage associated reproductive and health risks for women.
Area of Science:
- Genetics
- Prenatal Diagnostics
- Maternal Health
Background:
- Maternal X chromosome abnormalities can lead to discrepancies in noninvasive prenatal screening (NIPS) results.
- These discrepancies may result in unnecessary invasive testing for the fetus.
- Early diagnosis of maternal X chromosome abnormalities is crucial for managing reproductive and health risks.
Purpose of the Study:
- To validate a single nucleotide polymorphism (SNP)-based NIPS for detecting maternal X chromosome abnormalities.
- To assess the accuracy of NIPS in identifying specific maternal X chromosome conditions.
Main Methods:
- Prospective study design involving two groups: suspected maternal X abnormality (Group A, n=106) and suspected fetal aneuploidy (Group B, n=107).
- Maternal DNA isolated from plasma-depleted cellular pellets for blinded chromosomal microarray analysis.
- Criteria for abnormality: ≥5 Mb in size and present in ≥20% of DNA.
Main Results:
- Maternal X chromosome abnormalities were suspected in 0.08% of NIPS tests.
- NIPS confirmed maternal X chromosome abnormalities in 94.3% of Group A cases.
- Turner syndrome (45,X) and 47,XXX were the most common confirmed maternal abnormalities, with high detection rates.
Conclusions:
- NIPS demonstrates a high positive predictive value (94.3%) for maternal X chromosome abnormalities.
- A 100% negative predictive value was observed when screening for fetal chromosome abnormalities, indicating no maternal abnormalities were detected.
- Early identification of maternal X abnormalities via NIPS facilitates timely intervention for potential health complications.

