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Updated: Nov 24, 2025

Genome-Wide Analysis of DNA Methylation in Gastrointestinal Cancer
Published on: September 18, 2020
Trim47 overexpression correlates with poor prognosis in gastric cancer
YuJian Xia1, ZheWei Wei1, WeiBin Huang1
1Department of Gastrointestinal Surgery, The First Affiliated Hospital of Sun Yat-sen University, Guangzhou, Guangdong, China.
Abstract:
Trim47 is a member of the tripartite motif (TRIM) family that participates in many pathophysiological processes. However, the expression pattern and biological functions of Trim47 in gastric cancer (GC) remain unclear. The present study aimed to further explore the clinicopathological significance and potential prognostic role of Trim47 expression in GC. Therefore, in this study, Trim47 mRNA level was investigated in the Cancer Genome Atlas (TCGA) and Oncomine database in GC. We detected Trim47 mRNA and protein expression levels in GC and paired adjacent normal tissues. Kaplan-Meier method and Cox proportional hazard regression models were performed to analyze the survival of patients and prognostic factors. A gene set enrichment analysis (GSEA) was performed to determine the mechanism of Trim47 in GC. Our results indicated that Trim47 mRNA expression in GC tissues was significantly higher than adjacent normal tissues, as was Trim47 protein expression. Trim47 overexpression in GC tissues was significantly associated with tumor differentiation, T stage, N stage, M stage, and TNM stage. Kaplan-Meier analyses showed that high Trim47 expression was associated with worse overall survival (OS) and disease-free survival (DFS) in GC patients. Multivariate analysis confirmed that Trim47 expression was an independent prognostic factor for GC patients. Bioinformatics analysis and western blot indicated Trim47 might regulate GC through NF-κB, EMT, hypoxia, and apoptosis signaling pathway in GC. Our results show that Trim47 has the potential to serve as a novel prognostic biomarker in GC patients.
Insights
Tripartite motif 47 (Trim47) is overexpressed in gastric cancer (GC), correlating with advanced stages and poorer survival. High Trim47 expression indicates potential as a novel prognostic biomarker for GC patients.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- The tripartite motif (TRIM) family, including Trim47, is involved in various pathophysiological processes.
- The expression and function of Trim47 in gastric cancer (GC) are not well understood.
Purpose of the Study:
- To investigate the clinicopathological significance and prognostic value of Trim47 expression in GC.
- To explore the potential mechanisms underlying Trim47's role in GC progression.
Main Methods:
- Analysis of Trim47 mRNA levels in GC using TCGA and Oncomine databases.
- Measurement of Trim47 mRNA and protein expression in GC tissues and adjacent normal tissues.
- Survival analysis using Kaplan-Meier and Cox regression models.
- Gene Set Enrichment Analysis (GSEA) and Western blot for mechanistic insights.
Main Results:
- Trim47 mRNA and protein expression were significantly elevated in GC tissues compared to normal tissues.
- Overexpression of Trim47 was associated with poor tumor differentiation, advanced T, N, M, and TNM stages.
- High Trim47 expression correlated with worse overall survival (OS) and disease-free survival (DFS) in GC patients.
- Trim47 was identified as an independent prognostic factor for GC.
Conclusions:
- Trim47 overexpression is a significant indicator of poor prognosis in GC.
- Trim47 may regulate GC progression via pathways including NF-κB, EMT, hypoxia, and apoptosis.
- Trim47 presents potential as a novel prognostic biomarker for gastric cancer.
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