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Protein Diffusion in the Membrane01:24

Protein Diffusion in the Membrane

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Proteins show rotational as well as lateral diffusion across the membrane. The lateral diffusion of proteins was confirmed through the cell fusion experiment where mouse and human cells were fused, resulting in hybrid cells. When the human and mouse cells fused, the specific membrane proteins on human and mouse cells were marked with the red and green-fluorescent markers, respectively. Initially, the red and green fluorescence was located on the respective hemisphere of the cell. As time...
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Diffusion01:12

Diffusion

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Diffusion is the passive movement of substances down their concentration gradients—requiring no expenditure of cellular energy. Substances, such as molecules or ions, diffuse from an area of high concentration to an area of low concentration in the cytosol or across membranes. Eventually, the concentration will even out, with the substance moving randomly but causing no net change in concentration. Such a state is called dynamic equilibrium, which is essential for maintaining overall...
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Diffusion01:21

Diffusion

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Diffusion is a type of passive transport. In passive transport, a substance tends to move from an area of high concentration to an area of low concentration until the concentration is equal across the space. For example, take the diffusion of substances through the air. When someone opens a perfume bottle in a room filled with people, the perfume is at its highest concentration in the bottle and is at its lowest at the edges of the room. The perfume vapor will diffuse, or spread away, from the...
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Passive Diffusion: Overview and Kinetics01:17

Passive Diffusion: Overview and Kinetics

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Passive diffusion is a critical process that allows small lipophilic drugs to cross the cell membrane along a concentration gradient. This mechanism's efficiency depends on four primary factors: the membrane's surface area, the drug's lipid-water partition coefficient, the concentration gradient, and the membrane's thickness.
When administered orally, drugs establish a substantial concentration gradient between the gastrointestinal (GI) lumen and the bloodstream, expediting...
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Behavior of Gas Molecules: Molecular Diffusion, Mean Free Path, and Effusion03:48

Behavior of Gas Molecules: Molecular Diffusion, Mean Free Path, and Effusion

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Although gaseous molecules travel at tremendous speeds (hundreds of meters per second), they collide with other gaseous molecules and travel in many different directions before reaching the desired target. At room temperature, a gaseous molecule will experience billions of collisions per second. The mean free path is the average distance a molecule travels between collisions. The mean free path increases with decreasing pressure; in general, the mean free path for a gaseous molecule will be...
30.5K
Protein Dynamics in Living Cells01:19

Protein Dynamics in Living Cells

2.5K
Different fluorescence-based techniques are used to study the protein dynamics in living cells. These techniques include FRAP, FRET, and PET.
Fluorescent recovery after photobleaching (FRAP) is a fluorescent-protein-based detection technique used to quantify protein movement rates within the cell. This method exposes a small portion of the cell to an intense laser beam. The laser beam causes permanent photobleaching of the fluorophore-tagged proteins in the exposed region. As the bleached...
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Updated: Nov 24, 2025

The Diffusion of Passive Tracers in Laminar Shear Flow
08:01

The Diffusion of Passive Tracers in Laminar Shear Flow

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Space-dependent diffusion with stochastic resetting: A first-passage study.

Somrita Ray1

  • 1School of Chemistry, The Raymond and Beverly Sackler Center for Computational Molecular and Materials Science, The Center for Physics and Chemistry of Living Systems, and The Ratner Center for Single Molecule Science, Tel Aviv University, Tel Aviv 69978, Israel.

The Journal of Chemical Physics
|December 23, 2020
PubMed
Summary
This summary is machine-generated.

Stochastic resetting affects particle diffusion with bias. Resetting speeds up first-passage for attractive potentials (ν > 0) when ν < 3, but slows it down for ν > 3, revealing a key transition point.

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Last Updated: Nov 24, 2025

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Single-Molecule Tracking Microscopy - A Tool for Determining the Diffusive States of Cytosolic Molecules
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Area of Science:

  • Statistical Physics
  • Non-equilibrium Systems
  • Complex Systems

Background:

  • Diffusion processes are fundamental in physics and biology.
  • Spatially dependent diffusion and external potentials significantly alter particle dynamics.
  • Stochastic resetting introduces non-Markovian behavior, impacting first-passage times.

Purpose of the Study:

  • To investigate the influence of stochastic resetting on first-passage properties of biased diffusion with space-dependent diffusion coefficients.
  • To analytically derive survival probabilities and first-passage time distributions.
  • To characterize dynamical transitions and phase diagrams influenced by resetting.

Main Methods:

  • Analytical derivation of survival probability in Laplace space.
  • Analysis of first-passage time distribution in a limiting case.
  • Construction of a phase diagram based on the parameter ν = (1 + μD0-1).

Main Results:

  • An exact expression for survival probability and first-passage time distribution was derived.
  • The system exhibits dynamical transitions governed by the parameter ν.
  • A resetting transition occurs at ν = 3, altering the efficiency of first-passage.
  • For repulsive potentials (ν < 0), the origin is unreachable; for attractive potentials (ν > 0), it is eventually reached.

Conclusions:

  • Stochastic resetting introduces a tunable transition point (ν = 3) that can either accelerate or hinder first-passage.
  • The interplay between drift, diffusion, and resetting dictates the system's long-term behavior.
  • This work provides a foundation for studying resetting phenomena in more complex, inhomogeneous diffusion systems.